Publications

A Quality Improvement Approach to Increase Exercise Assessment in Survivors of Childhood Leukemia.
Coven SL, Bibart M, Frost R, Gallagher T, Guinipero T, Valasek AE, Olshefski R, Coven SL, Bibart M, Frost R, Gallagher T, Guinipero T, Valasek AE, Olshefski R. 2022. A Quality Improvement Approach to Increase Exercise Assessment in Survivors of Childhood Leukemia. Pediatric quality & safety 4(4): e198. DOI: 10.1097/pq9.0000000000000198
Rapid Electroformation of Biopolymer Gels in Prescribed Shapes and Patterns: A Simpler Alternative to 3-D Printing.
Gargava A, Ahn S, Bentley WE, Raghavan SR, Gargava A, Ahn S, Bentley WE, Raghavan SR. 2019. Rapid Electroformation of Biopolymer Gels in Prescribed Shapes and Patterns: A Simpler Alternative to 3-D Printing. ACS applied materials & interfaces 11(40): 37103-37111. DOI: 10.1021/acsami.9b12575
Flow Water Proton NMR: In-Line Process Analytical Technology for Continuous Biomanufacturing.
Taraban MB, Briggs KT, Merkel P, Yu YB, Taraban MB, Briggs KT, Merkel P, Yu YB. 2019. Flow Water Proton NMR: In-Line Process Analytical Technology for Continuous Biomanufacturing. Analytical chemistry 91(21): 13538-13546. DOI: 10.1021/acs.analchem.9b02622
Characterization of LysBC17, a Lytic Endopeptidase from Bacillus cereus.
Swift SM, Etobayeva IV, Reid KP, Waters JJ, Oakley BB, Donovan DM, Nelson DC, Swift SM, Etobayeva IV, Reid KP, Waters JJ, Oakley BB, Donovan DM, Nelson DC. 2019. Characterization of LysBC17, a Lytic Endopeptidase from <i>Bacillus cereus</i>. Antibiotics (Basel, Switzerland) 8(3): . DOI: 10.3390/antibiotics8030155
New Family of Water-Soluble Sulfo-Fluoro Polyphosphazenes and Their Assembly within Hemocompatible Nanocoatings.
Albright V, Marin A, Kaner P, Sukhishvili SA, Andrianov AK, Albright V, Marin A, Kaner P, Sukhishvili SA, Andrianov AK. 2019. New Family of Water-Soluble Sulfo-Fluoro Polyphosphazenes and Their Assembly within Hemocompatible Nanocoatings. ACS applied bio materials 2(9): 3897-3906. DOI: 10.1021/acsabm.9b00485
Bacterial co-culture with cell signaling translator and growth controller modules for autonomously regulated culture composition.
Stephens K, Pozo M, Tsao CY, Hauk P, Bentley WE, Stephens K, Pozo M, Tsao CY, Hauk P, Bentley WE. 2019. Bacterial co-culture with cell signaling translator and growth controller modules for autonomously regulated culture composition. Nature communications 10(1): 4129. DOI: 10.1038/s41467-019-12027-6
2D J-correlated proton NMR experiments for structural fingerprinting of biotherapeutics.
Brinson RG, Marino JP, Brinson RG, Marino JP. 2019. 2D J-correlated proton NMR experiments for structural fingerprinting of biotherapeutics. Journal of magnetic resonance (San Diego, Calif. : 1997) 307: 106581. DOI: 10.1016/j.jmr.2019.106581
Practical Guidelines for 13C-Based NMR Metabolomics.
Edison AS, Le Guennec A, Delaglio F, Kupče Ē, Edison AS, Le Guennec A, Delaglio F, Kupče Ē. 2019. Practical Guidelines for 13C-Based NMR Metabolomics. Methods in molecular biology (Clifton, N.J.) 2037: 69-95. DOI: 10.1007/978-1-4939-9690-2_5
Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Lepore R, Kryshtafovych A, Alahuhta M, Veraszto HA, Bomble YJ, Bufton JC, Bullock AN, Caba C, Cao H, Davies OR, et al. 2019. Target highlights in CASP13: Experimental target structures through the eyes of their authors. Proteins 87(12): 1037-1057. DOI: 10.1002/prot.25805
An asymmetry that leads to activity.
Varney KM, Cook ME, Weber DJ, Varney KM, Cook ME, Weber DJ. 2019. An asymmetry that leads to activity. Proceedings of the National Academy of Sciences of the United States of America 116(36): 17614-17615. DOI: 10.1073/pnas.1912729116
Pro- and Anti-oxidant Properties of Redox-Active Catechol-Chitosan Films.
Kim E, Kang M, Liu H, Cao C, Liu C, Bentley WE, Qu X, Payne GF, Kim E, Kang M, Liu H, Cao C, Liu C, Bentley WE, Qu X, Payne GF. 2019. Pro- and Anti-oxidant Properties of Redox-Active Catechol-Chitosan Films. Frontiers in chemistry 7: 541. DOI: 10.3389/fchem.2019.00541
Validation of oxidative stress assay for schizophrenia.
Kim E, Keskey Z, Kang M, Kitchen C, Bentley WE, Chen S, Kelly DL, Payne GF, Kim E, Keskey Z, Kang M, Kitchen C, Bentley WE, Chen S, Kelly DL, Payne GF. 2019. Validation of oxidative stress assay for schizophrenia. Schizophrenia research 212: 126-133. DOI: 10.1016/j.schres.2019.07.057
Second harmonic generation detection of Ras conformational changes and discovery of a small molecule binder.
Donohue E, Khorsand S, Mercado G, Varney KM, Wilder PT, Yu W, MacKerell AD, Alexander P, Van QN, Moree B, et al. 2019. Second harmonic generation detection of Ras conformational changes and discovery of a small molecule binder. Proceedings of the National Academy of Sciences of the United States of America 116(35): 17290-17297. DOI: 10.1073/pnas.1905516116
Translatome Profiling of Plum Pox Virus-Infected Leaves in European Plum Reveals Temporal and Spatial Coordination of Defense Responses in Phloem Tissues.
Collum TD, Stone AL, Sherman DJ, Rogers EE, Dardick C, Culver JN, Collum TD, Stone AL, Sherman DJ, Rogers EE, Dardick C, Culver JN. 2020. Translatome Profiling of Plum Pox Virus-Infected Leaves in European Plum Reveals Temporal and Spatial Coordination of Defense Responses in Phloem Tissues. Molecular plant-microbe interactions : MPMI 33(1): 66-77. DOI: 10.1094/MPMI-06-19-0152-FI
Assessment of predicted enzymatic activity of α-N-acetylglucosaminidase variants of unknown significance for CAGI 2016.
Clark WT, Kasak L, Bakolitsa C, Hu Z, Andreoletti G, Babbi G, Bromberg Y, Casadio R, Dunbrack R, Folkman L, et al. 2019. Assessment of predicted enzymatic activity of α-N-acetylglucosaminidase variants of unknown significance for CAGI 2016. Human mutation 40(9): 1519-1529. DOI: 10.1002/humu.23875
Reports from the fifth edition of CAGI: The Critical Assessment of Genome Interpretation.
Andreoletti G, Pal LR, Moult J, Brenner SE, Andreoletti G, Pal LR, Moult J, Brenner SE. 2019. Reports from the fifth edition of CAGI: The Critical Assessment of Genome Interpretation. Human mutation 40(9): 1197-1201. DOI: 10.1002/humu.23876
Newcastle disease virus vectors expressing consensus sequence of the H7 HA protein protect broiler chickens and turkeys against highly pathogenic H7N8 virus.
Roy Chowdhury I, Yeddula SGR, Pierce BG, Samal SK, Kim SH, Roy Chowdhury I, Yeddula SGR, Pierce BG, Samal SK, Kim SH. 2019. Newcastle disease virus vectors expressing consensus sequence of the H7 HA protein protect broiler chickens and turkeys against highly pathogenic H7N8 virus. Vaccine 37(35): 4956-4962. DOI: 10.1016/j.vaccine.2019.07.028
CAGI SickKids challenges: Assessment of phenotype and variant predictions derived from clinical and genomic data of children with undiagnosed diseases.
Kasak L, Hunter JM, Udani R, Bakolitsa C, Hu Z, Adhikari AN, Babbi G, Casadio R, Gough J, Guerrero RF, et al. 2019. CAGI SickKids challenges: Assessment of phenotype and variant predictions derived from clinical and genomic data of children with undiagnosed diseases. Human mutation 40(9): 1373-1391. DOI: 10.1002/humu.23874
Engineering Escherichia coli for enhanced sensitivity to the autoinducer-2 quorum sensing signal.
Stephens K, Zargar A, Emamian M, Abutaleb N, Choi E, Quan DN, Payne G, Bentley WE, Stephens K, Zargar A, Emamian M, Abutaleb N, Choi E, Quan DN, Payne G, Bentley WE. 2019. Engineering Escherichia coli for enhanced sensitivity to the autoinducer-2 quorum sensing signal. Biotechnology progress 35(6): e2881. DOI: 10.1002/btpr.2881
Assessing computational predictions of the phenotypic effect of cystathionine-beta-synthase variants.
Kasak L, Bakolitsa C, Hu Z, Yu C, Rine J, Dimster-Denk DF, Pandey G, De Baets G, Bromberg Y, Cao C, et al. 2019. Assessing computational predictions of the phenotypic effect of cystathionine-beta-synthase variants. Human mutation 40(9): 1530-1545. DOI: 10.1002/humu.23868