Publications

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Altered blood-brain barrier transport of nanotherapeutics in lysosomal storage diseases.
Solomon M, Loeck M, Silva-Abreau M, Moscoso R, Bautista R, Vigo M, Muro S. 2022. Altered blood-brain barrier transport of nanotherapeutics in lysosomal storage diseases. Journal of controlled release : official journal of the Controlled Release Society : . DOI: 10.1016/j.jconrel.2022.07.022
Benchmarking AlphaFold for protein complex modeling reveals accuracy determinants.
Yin R, Feng BY, Varshney A, Pierce BG. 2022. Benchmarking AlphaFold for protein complex modeling reveals accuracy determinants. Protein science : a publication of the Protein Society 31(8): e4379. DOI: 10.1002/pro.4379
Immunogenicity of Endolysin PlyC.
Harhala MA, Gembara K, Nelson DC, Miernikiewicz P, Dąbrowska K. 2022. Immunogenicity of Endolysin PlyC. Antibiotics (Basel, Switzerland) 11(7): . DOI: 10.3390/antibiotics11070966
Tuning Design Parameters of ICAM-1-Targeted 3DNA Nanocarriers to Optimize Pulmonary Targeting Depending on Drug Type.
Roki N, Solomon M, Bowers J, Getts L, Getts RC, Muro S. 2022. Tuning Design Parameters of ICAM-1-Targeted 3DNA Nanocarriers to Optimize Pulmonary Targeting Depending on Drug Type. Pharmaceutics 14(7): . DOI: 10.3390/pharmaceutics14071496
Editorial overview: Engineering and design.
Fleishman SJ, Mariuzza RA. 2022. Editorial overview: Engineering and design. Current opinion in structural biology 75: 102437. DOI: 10.1016/j.sbi.2022.102437
Structural Features of Antibody-Peptide Recognition.
Lee JH, Yin R, Ofek G, Pierce BG. 2022. Structural Features of Antibody-Peptide Recognition. Frontiers in immunology 13: 910367. DOI: 10.3389/fimmu.2022.910367
Selective C-Terminal Conjugation of Protease-Derived Native Peptides for Proteomic Measurements.
Xie T, Brady A, Velarde C, Vaccarello DN, Callahan NW, Marino JP, Orski SV. 2022. Selective C-Terminal Conjugation of Protease-Derived Native Peptides for Proteomic Measurements. Langmuir : the ACS journal of surfaces and colloids : . DOI: 10.1021/acs.langmuir.2c00359
Bacterial chemotaxis in static gradients quantified in a biopolymer membrane-integrated microfluidic platform.
Hu P, Ly KL, Pham LPH, Pottash AE, Sheridan K, Wu HC, Tsao CY, Quan D, Bentley WE, Rubloff GW, et al. 2022. Bacterial chemotaxis in static gradients quantified in a biopolymer membrane-integrated microfluidic platform. Lab on a chip : . DOI: 10.1039/d2lc00481j
CACHE (Critical Assessment of Computational Hit-finding Experiments): A public-private partnership benchmarking initiative to enable the development of computational methods for hit-finding.
Ackloo S, Al-Awar R, Amaro RE, Arrowsmith CH, Azevedo H, Batey RA, Bengio Y, Betz UAK, Bologa CG, Chodera JD, et al. 2022. CACHE (Critical Assessment of Computational Hit-finding Experiments): A public-private partnership benchmarking initiative to enable the development of computational methods for hit-finding. Nature reviews. Chemistry 6(4): 287-295. DOI: 10.1038/s41570-022-00363-z
Early human B cell signatures of the primary antibody response to mRNA vaccination.
Kardava L, Rachmaninoff N, Lau WW, Buckner CM, Trihemasava K, Blazkova J, Lopes de Assis F, Wang W, Zhang X, Wang Y, et al. 2022. Early human B cell signatures of the primary antibody response to mRNA vaccination. Proceedings of the National Academy of Sciences of the United States of America 119(28): e2204607119. DOI: 10.1073/pnas.2204607119
Accurate modeling of RNA hairpins through the explicit treatment of electronic polarizability with the classical Drude oscillator force field.
Sengul MY, MacKerell AD. 2022. Accurate modeling of RNA hairpins through the explicit treatment of electronic polarizability with the classical Drude oscillator force field. Journal of computational biophysics and chemistry 21(4): 461-471. DOI: 10.1142/s2737416521420060
Quantitative Agreement between Conformational Substates of Holo Calcium-Loaded Calmodulin Detected by Double Electron-Electron Resonance EPR and Predicted by Molecular Dynamics Simulations.
Schmidt T, Wang D, Jeon J, Schwieters CD, Clore GM. 2022. Quantitative Agreement between Conformational Substates of Holo Calcium-Loaded Calmodulin Detected by Double Electron-Electron Resonance EPR and Predicted by Molecular Dynamics Simulations. Journal of the American Chemical Society 144(27): 12043-12051. DOI: 10.1021/jacs.2c02201
EGR1 Upregulation during Encephalitic Viral Infections Contributes to Inflammation and Cell Death.
Lehman CW, Smith A, Kelly J, Jacobs JL, Dinman JD, Kehn-Hall K. 2022. EGR1 Upregulation during Encephalitic Viral Infections Contributes to Inflammation and Cell Death. Viruses 14(6): . DOI: 10.3390/v14061210
Network-based redox communication between abiotic interactive materials.
Li J, Zhao Z, Kim E, Rzasa JR, Zong G, Wang LX, Bentley WE, Payne GF. 2022. Network-based redox communication between abiotic interactive materials. iScience 25(7): 104548. DOI: 10.1016/j.isci.2022.104548
Chromatography at -30 °C for Reduced Back-Exchange, Reduced Carryover, and Improved Dynamic Range for Hydrogen-Deuterium Exchange Mass Spectrometry.
Anderson KW, Hudgens JW. 2022. Chromatography at -30 °C for Reduced Back-Exchange, Reduced Carryover, and Improved Dynamic Range for Hydrogen-Deuterium Exchange Mass Spectrometry. Journal of the American Society for Mass Spectrometry : . DOI: 10.1021/jasms.2c00096