Publications

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A High-Quality Genome Resource of Botrytis fragariae, a New and Rapidly Spreading Fungal Pathogen Causing Strawberry Gray Mold in the United States.
Wu Y, Saski C, Schnabel G, Xiao S, Hu M. 2021. A High-Quality Genome Resource of <i>Botrytis fragariae</i>, a New and Rapidly Spreading Fungal Pathogen Causing Strawberry Gray Mold in the United States. Phytopathology 111(3): 496-499. DOI: 10.1094/PHYTO-05-20-0204-IA
Leveraging nature's biomolecular designs in next-generation protein sequencing reagent development.
Tullman J, Marino JP, Kelman Z. 2020. Leveraging nature's biomolecular designs in next-generation protein sequencing reagent development. Applied microbiology and biotechnology 104(17): 7261-7271. DOI: 10.1007/s00253-020-10745-2
Structural and functional conservation of the programmed -1 ribosomal frameshift signal of SARS-CoV-2.
Kelly JA, Olson AN, Neupane K, Munshi S, Emeterio JS, Pollack L, Woodside MT, Dinman JD. 2020. Structural and functional conservation of the programmed -1 ribosomal frameshift signal of SARS-CoV-2. bioRxiv : the preprint server for biology : . DOI: 10.1101/2020.03.13.991083
CoV3D: A database and resource for high resolution coronavirus protein structures.
Gowthaman R, Guest JD, Yin R, Adolf-Bryfogle J, Schief WR, Pierce BG. 2020. CoV3D: A database and resource for high resolution coronavirus protein structures. bioRxiv : the preprint server for biology : . DOI: 10.1101/2020.05.12.091983
Structural and functional conservation of the programmed -1 ribosomal frameshift signal of SARS coronavirus 2 (SARS-CoV-2).
Kelly JA, Olson AN, Neupane K, Munshi S, San Emeterio J, Pollack L, Woodside MT, Dinman JD. 2020. Structural and functional conservation of the programmed -1 ribosomal frameshift signal of SARS coronavirus 2 (SARS-CoV-2). The Journal of biological chemistry 295(31): 10741-10748. DOI: 10.1074/jbc.AC120.013449
Analysis of a SARS-CoV-2-Infected Individual Reveals Development of Potent Neutralizing Antibodies with Limited Somatic Mutation.
Seydoux E, Homad LJ, MacCamy AJ, Parks KR, Hurlburt NK, Jennewein MF, Akins NR, Stuart AB, Wan YH, Feng J, et al. 2020. Analysis of a SARS-CoV-2-Infected Individual Reveals Development of Potent Neutralizing Antibodies with Limited Somatic Mutation. Immunity 53(1): 98-105.e5. DOI: 10.1016/j.immuni.2020.06.001
Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2.
Bhokisham N, Liu Y, Brown AD, Payne GF, Culver JN, Bentley WE. 2020. Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2. Biofabrication 12(4): 045017. DOI: 10.1088/1758-5090/ab9e7a
Polyelectrolyte in Electric Field: Disparate Conformational Behavior along an Aminopolysaccharide Chain.
Mahinthichaichan P, Tsai CC, Payne GF, Shen J. 2020. Polyelectrolyte in Electric Field: Disparate Conformational Behavior along an Aminopolysaccharide Chain. ACS omega 5(21): 12016-12026. DOI: 10.1021/acsomega.0c00164
Avoidance of Self during CRISPR Immunization.
Weissman JL, Stoltzfus A, Westra ER, Johnson PLF. 2020. Avoidance of Self during CRISPR Immunization. Trends in microbiology 28(7): 543-553. DOI: 10.1016/j.tim.2020.02.005
In Vivo and In Vitro Potency of Polyphosphazene Immunoadjuvants with Hepatitis C Virus Antigen and the Role of Their Supramolecular Assembly.
Andrianov AK, Marin A, Wang R, Chowdhury A, Agnihotri P, Yunus AS, Pierce BG, Mariuzza RA, Fuerst TR. 2021. <i>In Vivo</i> and <i>In Vitro</i> Potency of Polyphosphazene Immunoadjuvants with Hepatitis C Virus Antigen and the Role of Their Supramolecular Assembly. Molecular pharmaceutics 18(2): 726-734. DOI: 10.1021/acs.molpharmaceut.0c00487
Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Wu D, Gallagher DT, Gowthaman R, Pierce BG, Mariuzza RA. 2020. Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen. Nature communications 11(1): 2908. DOI: 10.1038/s41467-020-16755-y
Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, et al. 2020. Macromolecular modeling and design in Rosetta: recent methods and frameworks. Nature methods 17(7): 665-680. DOI: 10.1038/s41592-020-0848-2
Quality assurance at the point-of-care: Noninvasively detecting vaccine freezing variability using water proton NMR.
Briggs KT, Taraban MB, Yu YB. 2020. Quality assurance at the point-of-care: Noninvasively detecting vaccine freezing variability using water proton NMR. Vaccine 38(31): 4853-4860. DOI: 10.1016/j.vaccine.2020.05.049
Viral Hacks of the Plant Vasculature: The Role of Phloem Alterations in Systemic Virus Infection.
Kappagantu M, Collum TD, Dardick C, Culver JN. 2020. Viral Hacks of the Plant Vasculature: The Role of Phloem Alterations in Systemic Virus Infection. Annual review of virology 7(1): 351-370. DOI: 10.1146/annurev-virology-010320-072410
A redox-based electrogenetic CRISPR system to connect with and control biological information networks.
Bhokisham N, VanArsdale E, Stephens KT, Hauk P, Payne GF, Bentley WE. 2020. A redox-based electrogenetic CRISPR system to connect with and control biological information networks. Nature communications 11(1): 2427. DOI: 10.1038/s41467-020-16249-x