Publications

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Ligand-induced changes in 2-aminopurine fluorescence as a probe for small molecule binding to HIV-1 TAR RNA.
Bradrick TD, Marino JP. 2004. Ligand-induced changes in 2-aminopurine fluorescence as a probe for small molecule binding to HIV-1 TAR RNA. RNA (New York, N.Y.) 10(9): 1459-68.
Surface-plasmon-resonance-enhanced cavity ring-down detection.
Pipino AC, Woodward JT, Meuse CW, Silin V. 2004. Surface-plasmon-resonance-enhanced cavity ring-down detection. The Journal of chemical physics 120(3): 1585-93.
Mechanical properties of biomimetic tissue adhesive based on the microbial transglutaminase-catalyzed crosslinking of gelatin.
McDermott MK, Chen T, Williams CM, Markley KM, Payne GF. 2022. Mechanical properties of biomimetic tissue adhesive based on the microbial transglutaminase-catalyzed crosslinking of gelatin. Biomacromolecules 5(4): 1270-9.
Novel structure and nucleotide binding properties of HI1480 from Haemophilus influenzae: a protein with no known sequence homologues.
Lim K, Sarikaya E, Galkin A, Krajewski W, Pullalarevu S, Shin JH, Kelman Z, Howard A, Herzberg O. 2004. Novel structure and nucleotide binding properties of HI1480 from Haemophilus influenzae: a protein with no known sequence homologues. Proteins 56(3): 564-71.
YbdK is a carboxylate-amine ligase with a gamma-glutamyl:Cysteine ligase activity: crystal structure and enzymatic assays.
Lehmann C, Doseeva V, Pullalarevu S, Krajewski W, Howard A, Herzberg O. 2004. YbdK is a carboxylate-amine ligase with a gamma-glutamyl:Cysteine ligase activity: crystal structure and enzymatic assays. Proteins 56(2): 376-83.
Characterization of endothelial internalization and targeting of antibody-enzyme conjugates in cell cultures and in laboratory animals.
Muro S, Muzykantov VR, Murciano JC. 2004. Characterization of endothelial internalization and targeting of antibody-enzyme conjugates in cell cultures and in laboratory animals. Methods in molecular biology (Clifton, N.J.) 283: 21-36.
An empirical backbone-backbone hydrogen-bonding potential in proteins and its applications to NMR structure refinement and validation.
Grishaev A, Bax A. 2004. An empirical backbone-backbone hydrogen-bonding potential in proteins and its applications to NMR structure refinement and validation. Journal of the American Chemical Society 126(23): 7281-92.
Inhibiting S100B restores p53 levels in primary malignant melanoma cancer cells.
Lin J, Yang Q, Yan Z, Markowitz J, Wilder PT, Carrier F, Weber DJ. 2004. Inhibiting S100B restores p53 levels in primary malignant melanoma cancer cells. The Journal of biological chemistry 279(32): 34071-7.
Molecular modeling of protein function regions.
DeWeese-Scott C, Moult J. 2004. Molecular modeling of protein function regions. Proteins 55(4): 942-61.
Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha.
Guan R, Malchiodi EL, Wang Q, Schuck P, Mariuzza RA. 2004. Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha. The Journal of biological chemistry 279(30): 31873-82.
Molecular evolution: introns fall into place.
Stoltzfus A. 2004. Molecular evolution: introns fall into place. Current biology : CB 14(9): R351-2.
Crystal structure of the YffB protein from Pseudomonas aeruginosa suggests a glutathione-dependent thiol reductase function.
Teplyakov A, Pullalarevu S, Obmolova G, Doseeva V, Galkin A, Herzberg O, Dauter M, Dauter Z, Gilliland GL. 2004. Crystal structure of the YffB protein from Pseudomonas aeruginosa suggests a glutathione-dependent thiol reductase function. BMC structural biology 4: 5.
Biochemical characterization of the Methanothermobacter thermautotrophicus minichromosome maintenance (MCM) helicase N-terminal domains.
Kasiviswanathan R, Shin JH, Melamud E, Kelman Z. 2004. Biochemical characterization of the Methanothermobacter thermautotrophicus minichromosome maintenance (MCM) helicase N-terminal domains. The Journal of biological chemistry 279(27): 28358-66.
Complete relative stereochemistry of multiple stereocenters using only residual dipolar couplings.
Yan J, Delaglio F, Kaerner A, Kline AD, Mo H, Shapiro MJ, Smitka TA, Stephenson GA, Zartler ER. 2004. Complete relative stereochemistry of multiple stereocenters using only residual dipolar couplings. Journal of the American Chemical Society 126(15): 5008-17.
Conformational flexibility of PEP mutase.
Liu S, Lu Z, Han Y, Jia Y, Howard A, Dunaway-Mariano D, Herzberg O. 2004. Conformational flexibility of PEP mutase. Biochemistry 43(15): 4447-53.