Publications

Automated Sample Preparation and Data Collection Workflow for High-Throughput In Vitro Metabolomics.
Malinowska JM, Palosaari T, Sund J, Carpi D, Lloyd GR, Weber RJM, Whelan M, Viant MR, Malinowska JM, Palosaari T, Sund J, Carpi D, Lloyd GR, Weber RJM, Whelan M, Viant MR. 2022. Automated Sample Preparation and Data Collection Workflow for High-Throughput In Vitro Metabolomics. Metabolites 12(1): . DOI: 10.3390/metabo12010052
Computational and Experimental Characterization of rDNA and rRNA G-Quadruplexes.
Green AT, Pickard AJ, Li R, MacKerell AD, Bierbach U, Cho SS, Green AT, Pickard AJ, Li R, MacKerell AD, Bierbach U, Cho SS. 2022. Computational and Experimental Characterization of rDNA and rRNA G-Quadruplexes. The journal of physical chemistry. B : . DOI: 10.1021/acs.jpcb.1c08340
Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors.
Wu D, Kolesnikov A, Yin R, Guest JD, Gowthaman R, Shmelev A, Serdyuk Y, Dianov DV, Efimov GA, Pierce BG, et al. 2022. Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors. Nature communications 13(1): 19. DOI: 10.1038/s41467-021-27669-8
Cationic Fluoropolyphosphazenes: Synthesis and Assembly with Heparin as a Pathway to Hemocompatible Nanocoatings.
Marin A, Brito J, Sukhishvili SA, Andrianov AK, Marin A, Brito J, Sukhishvili SA, Andrianov AK. 2021. Cationic Fluoropolyphosphazenes: Synthesis and Assembly with Heparin as a Pathway to Hemocompatible Nanocoatings. ACS applied bio materials : . DOI: 10.1021/acsabm.1c01099
Circular Dichroism Spectral Similarity Plots to Extend Validation and Correction to All Measured Wavelengths.
Meuse CW, Meuse CW. 2022. Circular Dichroism Spectral Similarity Plots to Extend Validation and Correction to All Measured Wavelengths. Applied spectroscopy : 37028211057129. DOI: 10.1177/00037028211057129
Solution Structures of Bacillus anthracis Protective Antigen Proteins Using Small Angle Neutron Scattering and Protective Antigen 63 Ion Channel Formation Kinetics.
Michelman-Ribeiro A, Rubinson KA, Silin V, Kasianowicz JJ, Michelman-Ribeiro A, Rubinson KA, Silin V, Kasianowicz JJ. 2021. Solution Structures of <i>Bacillus anthracis</i> Protective Antigen Proteins Using Small Angle Neutron Scattering and Protective Antigen 63 Ion Channel Formation Kinetics. Toxins 13(12): . DOI: 10.3390/toxins13120888
Excipient Innovation Through Precompetitive Research.
Yu YB, Taraban MB, Briggs KT, Brinson RG, Marino JP, Yu YB, Taraban MB, Briggs KT, Brinson RG, Marino JP. 2021. Excipient Innovation Through Precompetitive Research. Pharmaceutical research 38(12): 2179-2184. DOI: 10.1007/s11095-021-03157-y
Highly conserved s2m element of SARS-CoV-2 dimerizes via a kissing complex and interacts with host miRNA-1307-3p.
Imperatore JA, Cunningham CL, Pellegrene KA, Brinson RG, Marino JP, Evanseck JD, Mihailescu MR, Imperatore JA, Cunningham CL, Pellegrene KA, Brinson RG, Marino JP, Evanseck JD, Mihailescu MR. 2021. Highly conserved s2m element of SARS-CoV-2 dimerizes via a kissing complex and interacts with host miRNA-1307-3p. Nucleic acids research : . DOI: 10.1093/nar/gkab1226
HDX-MS and MD Simulations Provide Evidence for Stabilization of the IgG1-FcγRIa (CD64a) Immune Complex Through Intermolecular Glycoprotein Bonds.
Anderson KW, Bergonzo C, Scott K, Karageorgos IL, Gallagher ES, Tayi VS, Butler M, Hudgens JW, Anderson KW, Bergonzo C, Scott K, Karageorgos IL, Gallagher ES, Tayi VS, Butler M, Hudgens JW. 2021. HDX-MS and MD Simulations Provide Evidence for Stabilization of the IgG1-FcγRIa (CD64a) Immune Complex Through Intermolecular Glycoprotein Bonds. Journal of molecular biology 434(2): 167391. DOI: 10.1016/j.jmb.2021.167391
Practical Applications of NMR to Solve Real-World Problems.
Brinson RG, Brinson RG. 2021. Practical Applications of NMR to Solve Real-World Problems. Molecules (Basel, Switzerland) 26(23): . DOI: 10.3390/molecules26237091
N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum α-Glucosidases I and II with Antiviral Activity.
Karade SS, Hill ML, Kiappes JL, Manne R, Aakula B, Zitzmann N, Warfield KL, Treston AM, Mariuzza RA, Karade SS, Hill ML, Kiappes JL, Manne R, Aakula B, Zitzmann N, Warfield KL, Treston AM, Mariuzza RA. 2021. N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum α-Glucosidases I and II with Antiviral Activity. Journal of medicinal chemistry 64(24): 18010-18024. DOI: 10.1021/acs.jmedchem.1c01377
Nano-Assembly of Quisinostat and Biodegradable Macromolecular Carrier Results in Supramolecular Complexes with Slow-Release Capabilities.
Chowdhury A, Marin A, Weber DJ, Andrianov AK, Chowdhury A, Marin A, Weber DJ, Andrianov AK. 2021. Nano-Assembly of Quisinostat and Biodegradable Macromolecular Carrier Results in Supramolecular Complexes with Slow-Release Capabilities. Pharmaceutics 13(11): . DOI: 10.3390/pharmaceutics13111834
Parsed synthesis of pyocyanin via co-culture enables context-dependent intercellular redox communication.
Chun K, Stephens K, Wang S, Tsao CY, Payne GF, Bentley WE, Chun K, Stephens K, Wang S, Tsao CY, Payne GF, Bentley WE. 2021. Parsed synthesis of pyocyanin via co-culture enables context-dependent intercellular redox communication. Microbial cell factories 20(1): 215. DOI: 10.1186/s12934-021-01703-2
Rapid and Noninvasive Quantification of Capsid Gene Filling Level Using Water Proton Nuclear Magnetic Resonance.
Taraban MB, Jones MT, Yu YB, Taraban MB, Jones MT, Yu YB. 2021. Rapid and Noninvasive Quantification of Capsid Gene Filling Level Using Water Proton Nuclear Magnetic Resonance. Analytical chemistry 93(48): 15816-15820. DOI: 10.1021/acs.analchem.1c04088
Knockout of Anopheles stephensi immune gene LRIM1 by CRISPR-Cas9 reveals its unexpected role in reproduction and vector competence.
Inbar E, Eappen AG, Alford RT, Reid W, Harrell RA, Hosseini M, Chakravarty S, Li T, Sim BKL, Billingsley PF, et al. 2021. Knockout of Anopheles stephensi immune gene LRIM1 by CRISPR-Cas9 reveals its unexpected role in reproduction and vector competence. PLoS pathogens 17(11): e1009770. DOI: 10.1371/journal.ppat.1009770
DNA Dye Sytox Green in Detection of Bacteriolytic Activity: High Speed, Precision and Sensitivity Demonstrated With Endolysins.
Harhala M, Gembara K, Miernikiewicz P, Owczarek B, Kaźmierczak Z, Majewska J, Nelson DC, Dąbrowska K, Harhala M, Gembara K, Miernikiewicz P, Owczarek B, Kaźmierczak Z, Majewska J, Nelson DC, Dąbrowska K. 2021. DNA Dye Sytox Green in Detection of Bacteriolytic Activity: High Speed, Precision and Sensitivity Demonstrated With Endolysins. Frontiers in microbiology 12: 752282. DOI: 10.3389/fmicb.2021.752282
Fusing an insoluble protein to GroEL apical domain enhances soluble expression in Escherichia coli.
Reddy PT, O'Dell WB, Reddy PT, O'Dell WB. 2021. Fusing an insoluble protein to GroEL apical domain enhances soluble expression in Escherichia coli. Methods in enzymology 659: 171-188. DOI: 10.1016/bs.mie.2021.09.002
Preface.
Kelman Z, O'Dell WB, Kelman Z, O'Dell WB. 2021. Preface. Methods in enzymology 659: xix-xxiii. DOI: 10.1016/S0076-6879(21)00414-6
Preface.
O'Dell WB, Kelman Z, O'Dell WB, Kelman Z. 2021. Preface. Methods in enzymology 660: xvii-xxii. DOI: 10.1016/S0076-6879(21)00449-3
Molecular Determinants of Filament Capping Proteins Required for the Formation of Functional Flagella in Gram-Negative Bacteria.
Nedeljković M, Postel S, Pierce BG, Sundberg EJ, Nedeljković M, Postel S, Pierce BG, Sundberg EJ. 2021. Molecular Determinants of Filament Capping Proteins Required for the Formation of Functional Flagella in Gram-Negative Bacteria. Biomolecules 11(10): . DOI: 10.3390/biom11101397