Publications

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The periplasmic domain of TolR from Haemophilus influenzae forms a dimer with a large hydrophobic groove: NMR solution structure and comparison to SAXS data.
Parsons LM, Grishaev A, Bax A. 2008. The periplasmic domain of TolR from Haemophilus influenzae forms a dimer with a large hydrophobic groove: NMR solution structure and comparison to SAXS data. Biochemistry 47(10): 3131-42. DOI: 10.1021/bi702283x
Structure/function analysis of yeast ribosomal protein L2.
Meskauskas A, Russ JR, Dinman JD. 2008. Structure/function analysis of yeast ribosomal protein L2. Nucleic acids research 36(6): 1826-35. DOI: 10.1093/nar/gkn034
Structure of YciA from Haemophilus influenzae (HI0827), a hexameric broad specificity acyl-coenzyme A thioesterase.
Willis MA, Zhuang Z, Song F, Howard A, Dunaway-Mariano D, Herzberg O. 2008. Structure of YciA from Haemophilus influenzae (HI0827), a hexameric broad specificity acyl-coenzyme A thioesterase. Biochemistry 47(9): 2797-805. DOI: 10.1021/bi702336d
New crystal structures of ColE1 Rom and variants resulting from mutation of a surface exposed residue: Implications for RNA-recognition.
Struble EB, Ladner JE, Brabazon DM, Marino JP. 2008. New crystal structures of ColE1 Rom and variants resulting from mutation of a surface exposed residue: Implications for RNA-recognition. Proteins 72(2): 761-8. DOI: 10.1002/prot.21965
A Hadamard transform electron ionization time-of-flight mass spectrometer.
Hudgens JW, Bergeron DE. 2008. A Hadamard transform electron ionization time-of-flight mass spectrometer. The Review of scientific instruments 79(1): 014102. DOI: 10.1063/1.2838174
Lattice model simulation of interchain protein interactions and the folding dynamics and dimerization of the GCN4 Leucine zipper.
Liu Y, Chapagain PP, Parra JL, Gerstman BS. 2008. Lattice model simulation of interchain protein interactions and the folding dynamics and dimerization of the GCN4 Leucine zipper. The Journal of chemical physics 128(4): 045106. DOI: 10.1063/1.2831513
Divergence of function in the hot dog fold enzyme superfamily: the bacterial thioesterase YciA.
Zhuang Z, Song F, Zhao H, Li L, Cao J, Eisenstein E, Herzberg O, Dunaway-Mariano D. 2008. Divergence of function in the hot dog fold enzyme superfamily: the bacterial thioesterase YciA. Biochemistry 47(9): 2789-96. DOI: 10.1021/bi702334h
Chitosan biotinylation and electrodeposition for selective protein assembly.
Shi XW, Liu Y, Lewandowski AT, Wu LQ, Wu HC, Ghodssi R, Rubloff GW, Bentley WE, Payne GF. 2008. Chitosan biotinylation and electrodeposition for selective protein assembly. Macromolecular bioscience 8(5): 451-7. DOI: 10.1002/mabi.200700220
Microarray analysis of toxicogenomic effects of triclosan on Staphylococcus aureus.
Jang HJ, Chang MW, Toghrol F, Bentley WE. 2008. Microarray analysis of toxicogenomic effects of triclosan on Staphylococcus aureus. Applied microbiology and biotechnology 78(4): 695-707. DOI: 10.1007/s00253-008-1349-x
rRNA mutants in the yeast peptidyltransferase center reveal allosteric information networks and mechanisms of drug resistance.
Rakauskaite R, Dinman JD. 2008. rRNA mutants in the yeast peptidyltransferase center reveal allosteric information networks and mechanisms of drug resistance. Nucleic acids research 36(5): 1497-507. DOI: 10.1093/nar/gkm1179
Synergistic effect of a novel antiandrogen, VN/124-1, and signal transduction inhibitors in prostate cancer progression to hormone independence in vitro.
Schayowitz A, Sabnis G, Njar VC, Brodie AM. 2008. Synergistic effect of a novel antiandrogen, VN/124-1, and signal transduction inhibitors in prostate cancer progression to hormone independence in vitro. Molecular cancer therapeutics 7(1): 121-32. DOI: 10.1158/1535-7163.MCT-07-0581
Evaluation of microwave-accelerated residue-specific acid cleavage for proteomic applications.
Swatkoski S, Gutierrez P, Wynne C, Petrov A, Dinman JD, Edwards N, Fenselau C. 2008. Evaluation of microwave-accelerated residue-specific acid cleavage for proteomic applications. Journal of proteome research 7(2): 579-86. DOI: 10.1021/pr070502c
Self-assembled monolayers of an oligo(ethylene oxide) disulfide and its corresponding thiol assembled from water: characterization and protein resistance.
Vanderah DJ, Walker ML, Rocco MA, Rubinson KA. 2008. Self-assembled monolayers of an oligo(ethylene oxide) disulfide and its corresponding thiol assembled from water: characterization and protein resistance. Langmuir : the ACS journal of surfaces and colloids 24(3): 826-9. DOI: 10.1021/la7028824
Coupling of DNA binding and helicase activity is mediated by a conserved loop in the MCM protein.
Sakakibara N, Kasiviswanathan R, Melamud E, Han M, Schwarz FP, Kelman Z. 2008. Coupling of DNA binding and helicase activity is mediated by a conserved loop in the MCM protein. Nucleic acids research 36(4): 1309-20. DOI: 10.1093/nar/gkm1160
Comparative modeling in structural genomics.
Moult J. 2008. Comparative modeling in structural genomics. Structure (London, England : 1993) 16(1): 14-6. DOI: 10.1016/j.str.2007.12.001