Publications

Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2.
Bhokisham N, Liu Y, Brown AD, Payne GF, Culver JN, Bentley WE, Bhokisham N, Liu Y, Brown AD, Payne GF, Culver JN, Bentley WE. 2020. Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2. Biofabrication 12(4): 045017. DOI: 10.1088/1758-5090/ab9e7a
Polyelectrolyte in Electric Field: Disparate Conformational Behavior along an Aminopolysaccharide Chain.
Mahinthichaichan P, Tsai CC, Payne GF, Shen J, Mahinthichaichan P, Tsai CC, Payne GF, Shen J. 2020. Polyelectrolyte in Electric Field: Disparate Conformational Behavior along an Aminopolysaccharide Chain. ACS omega 5(21): 12016-12026. DOI: 10.1021/acsomega.0c00164
Avoidance of Self during CRISPR Immunization.
Weissman JL, Stoltzfus A, Westra ER, Johnson PLF, Weissman JL, Stoltzfus A, Westra ER, Johnson PLF. 2020. Avoidance of Self during CRISPR Immunization. Trends in microbiology 28(7): 543-553. DOI: 10.1016/j.tim.2020.02.005
In Vivo and In Vitro Potency of Polyphosphazene Immunoadjuvants with Hepatitis C Virus Antigen and the Role of Their Supramolecular Assembly.
Andrianov AK, Marin A, Wang R, Chowdhury A, Agnihotri P, Yunus AS, Pierce BG, Mariuzza RA, Fuerst TR, Andrianov AK, Marin A, Wang R, Chowdhury A, Agnihotri P, Yunus AS, Pierce BG, Mariuzza RA, Fuerst TR. 2021. <i>In Vivo</i> and <i>In Vitro</i> Potency of Polyphosphazene Immunoadjuvants with Hepatitis C Virus Antigen and the Role of Their Supramolecular Assembly. Molecular pharmaceutics 18(2): 726-734. DOI: 10.1021/acs.molpharmaceut.0c00487
Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Wu D, Gallagher DT, Gowthaman R, Pierce BG, Mariuzza RA, Wu D, Gallagher DT, Gowthaman R, Pierce BG, Mariuzza RA. 2020. Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen. Nature communications 11(1): 2908. DOI: 10.1038/s41467-020-16755-y
Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, et al. 2020. Macromolecular modeling and design in Rosetta: recent methods and frameworks. Nature methods 17(7): 665-680. DOI: 10.1038/s41592-020-0848-2
Quality assurance at the point-of-care: Noninvasively detecting vaccine freezing variability using water proton NMR.
Briggs KT, Taraban MB, Yu YB, Briggs KT, Taraban MB, Yu YB. 2020. Quality assurance at the point-of-care: Noninvasively detecting vaccine freezing variability using water proton NMR. Vaccine 38(31): 4853-4860. DOI: 10.1016/j.vaccine.2020.05.049
Viral Hacks of the Plant Vasculature: The Role of Phloem Alterations in Systemic Virus Infection.
Kappagantu M, Collum TD, Dardick C, Culver JN, Kappagantu M, Collum TD, Dardick C, Culver JN. 2020. Viral Hacks of the Plant Vasculature: The Role of Phloem Alterations in Systemic Virus Infection. Annual review of virology 7(1): 351-370. DOI: 10.1146/annurev-virology-010320-072410
A redox-based electrogenetic CRISPR system to connect with and control biological information networks.
Bhokisham N, VanArsdale E, Stephens KT, Hauk P, Payne GF, Bentley WE, Bhokisham N, VanArsdale E, Stephens KT, Hauk P, Payne GF, Bentley WE. 2020. A redox-based electrogenetic CRISPR system to connect with and control biological information networks. Nature communications 11(1): 2427. DOI: 10.1038/s41467-020-16249-x
De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Sesterhenn F, Yang C, Bonet J, Cramer JT, Wen X, Wang Y, Chiang CI, Abriata LA, Kucharska I, Castoro G, et al. 2020. De novo protein design enables the precise induction of RSV-neutralizing antibodies. Science (New York, N.Y.) 368(6492): . DOI: 10.1126/science.aay5051
Assessment of the Higher-Order Structure of Formulated Monoclonal Antibody Therapeutics by 2D Methyl Correlated NMR and Principal Component Analysis.
Arbogast LW, Delaglio F, Brinson RG, Marino JP, Arbogast LW, Delaglio F, Brinson RG, Marino JP. 2020. Assessment of the Higher-Order Structure of Formulated Monoclonal Antibody Therapeutics by 2D Methyl Correlated NMR and Principal Component Analysis. Current protocols in protein science 100(1): e105. DOI: 10.1002/cpps.105
Intertwined mechanisms define transport of anti-ICAM nanocarriers across the endothelium and brain delivery of a therapeutic enzyme.
Manthe RL, Loeck M, Bhowmick T, Solomon M, Muro S, Manthe RL, Loeck M, Bhowmick T, Solomon M, Muro S. 2020. Intertwined mechanisms define transport of anti-ICAM nanocarriers across the endothelium and brain delivery of a therapeutic enzyme. Journal of controlled release : official journal of the Controlled Release Society 324: 181-193. DOI: 10.1016/j.jconrel.2020.05.009
Citron C-05 inhibits both the penetration and colonization of Xanthomonas citri subsp. citri to achieve resistance to citrus canker disease.
Fu H, Zhao M, Xu J, Tan L, Han J, Li D, Wang M, Xiao S, Ma X, Deng Z, Fu H, Zhao M, Xu J, Tan L, Han J, Li D, Wang M, Xiao S, Ma X, Deng Z. 2020. Citron C-05 inhibits both the penetration and colonization of <i>Xanthomonas citri</i> subsp. <i>citri</i> to achieve resistance to citrus canker disease. Horticulture research 7(1): 58. DOI: 10.1038/s41438-020-0278-4
Phylotastic: Improving Access to Tree-of-Life Knowledge With Flexible, on-the-Fly Delivery of Trees.
Nguyen VD, Nguyen TH, Tayeen ASM, Laughinghouse HD, Sánchez-Reyes LL, Wiggins J, Pontelli E, Mozzherin D, O'Meara B, Stoltzfus A, Nguyen VD, Nguyen TH, Tayeen ASM, Laughinghouse HD, Sánchez-Reyes LL, Wiggins J, Pontelli E, Mozzherin D, O'Meara B, Stoltzfus A. 2020. Phylotastic: Improving Access to Tree-of-Life Knowledge With Flexible, on-the-Fly Delivery of Trees. Evolutionary bioinformatics online 16: 1176934319899384. DOI: 10.1177/1176934319899384
The importance and future of biochemical engineering.
Whitehead TA, Banta S, Bentley WE, Betenbaugh MJ, Chan C, Clark DS, Hoesli CA, Jewett MC, Junker B, Koffas M, et al. 2020. The importance and future of biochemical engineering. Biotechnology and bioengineering 117(8): 2305-2318. DOI: 10.1002/bit.27364
Synthetic Biology for Manipulating Quorum Sensing in Microbial Consortia.
Stephens K, Bentley WE, Stephens K, Bentley WE. 2020. Synthetic Biology for Manipulating Quorum Sensing in Microbial Consortia. Trends in microbiology 28(8): 633-643. DOI: 10.1016/j.tim.2020.03.009
Differential Interactions of Piscidins with Phospholipids and Lipopolysaccharides at Membrane Interfaces.
Cetuk H, Maramba J, Britt M, Scott AJ, Ernst RK, Mihailescu M, Cotten ML, Sukharev S, Cetuk H, Maramba J, Britt M, Scott AJ, Ernst RK, Mihailescu M, Cotten ML, Sukharev S. 2020. Differential Interactions of Piscidins with Phospholipids and Lipopolysaccharides at Membrane Interfaces. Langmuir : the ACS journal of surfaces and colloids 36(18): 5065-5077. DOI: 10.1021/acs.langmuir.0c00017
Cellular origins and genetic landscape of cutaneous gamma delta T cell lymphomas.
Daniels J, Doukas PG, Escala MEM, Ringbloom KG, Shih DJH, Yang J, Tegtmeyer K, Park J, Thomas JJ, Selli ME, et al. 2020. Cellular origins and genetic landscape of cutaneous gamma delta T cell lymphomas. Nature communications 11(1): 1806. DOI: 10.1038/s41467-020-15572-7
Comparative Analysis of One-Dimensional Protein Fingerprint by Line Shape Enhancement and Two-Dimensional 1H,13C Methyl NMR Methods for Characterization of the Higher Order Structure of IgG1 Monoclonal Antibodies.
Elliott KW, Ghasriani H, Wikström M, Giddens JP, Aubin Y, Delaglio F, Marino JP, Arbogast LW, Elliott KW, Ghasriani H, Wikström M, Giddens JP, Aubin Y, Delaglio F, Marino JP, Arbogast LW. 2020. Comparative Analysis of One-Dimensional Protein Fingerprint by Line Shape Enhancement and Two-Dimensional 1H,13C Methyl NMR Methods for Characterization of the Higher Order Structure of IgG1 Monoclonal Antibodies. Analytical chemistry 92(9): 6366-6373. DOI: 10.1021/acs.analchem.9b05385
Best Practices in Utilization of 2D-NMR Spectral Data as the Input for Chemometric Analysis in Biopharmaceutical Applications.
Brinson RG, Arbogast LW, Marino JP, Delaglio F, Brinson RG, Arbogast LW, Marino JP, Delaglio F. 2020. Best Practices in Utilization of 2D-NMR Spectral Data as the Input for Chemometric Analysis in Biopharmaceutical Applications. Journal of chemical information and modeling 60(4): 2339-2355. DOI: 10.1021/acs.jcim.0c00081