Publications

Quorum Sensing Communication: Molecularly Connecting Cells, Their Neighbors, and Even Devices.
Wang S, Payne GF, Bentley WE, Wang S, Payne GF, Bentley WE. 2020. Quorum Sensing Communication: Molecularly Connecting Cells, Their Neighbors, and Even Devices. Annual review of chemical and biomolecular engineering 11: 447-468. DOI: 10.1146/annurev-chembioeng-101519-124728
A New Approach to Assess mAb Aggregation.
Turko IV, Turko IV. 2020. A New Approach to Assess mAb Aggregation. Methods in molecular biology (Clifton, N.J.) 2131: 245-254. DOI: 10.1007/978-1-0716-0389-5_12
Modeling and Viewing T Cell Receptors Using TCRmodel and TCR3d.
Gowthaman R, Pierce BG, Gowthaman R, Pierce BG. 2020. Modeling and Viewing T Cell Receptors Using TCRmodel and TCR3d. Methods in molecular biology (Clifton, N.J.) 2120: 197-212. DOI: 10.1007/978-1-0716-0327-7_14
Optimization of a Benzothiazole Indolene Scaffold Targeting Bacterial Cell Wall Assembly.
Chauhan J, Yu W, Cardinale S, Opperman TJ, MacKerell AD, Fletcher S, de Leeuw EP, Chauhan J, Yu W, Cardinale S, Opperman TJ, MacKerell AD, Fletcher S, de Leeuw EP. 2020. Optimization of a Benzothiazole Indolene Scaffold Targeting Bacterial Cell Wall Assembly. Drug design, development and therapy 14: 567-574. DOI: 10.2147/DDDT.S226313
Redox Is a Global Biodevice Information Processing Modality.
Kim E, Li J, Kang M, Kelly DL, Chen S, Napolitano A, Panzella L, Shi X, Yan K, Wu S, et al. 2019. Redox Is a Global Biodevice Information Processing Modality. Proceedings of the IEEE. Institute of Electrical and Electronics Engineers 107(7): 1402-1424. DOI: 10.1109/JPROC.2019.2908582
Catechol-Based Capacitor for Redox-Linked Bioelectronics.
Wu S, Kim E, Li J, Bentley WE, Shi XW, Payne GF, Wu S, Kim E, Li J, Bentley WE, Shi XW, Payne GF. 2019. Catechol-Based Capacitor for Redox-Linked Bioelectronics. ACS applied electronic materials 1(8): 1337-1347. DOI: 10.1021/acsaelm.9b00272
HIV-1 gp120-CD4-Induced Antibody Complex Elicits CD4 Binding Site-Specific Antibody Response in Mice.
Galkin A, Chen Y, Guenaga J, O'Dell S, Acevedo R, Steinhardt JJ, Wang Y, Wilson R, Chiang CI, Doria-Rose N, et al. 2020. HIV-1 gp120-CD4-Induced Antibody Complex Elicits CD4 Binding Site-Specific Antibody Response in Mice. Journal of immunology (Baltimore, Md. : 1950) 204(6): 1543-1561. DOI: 10.4049/jimmunol.1901051
Association of Model Neurotransmitters with Lipid Bilayer Membranes.
Josey BP, Heinrich F, Silin V, Lösche M, Josey BP, Heinrich F, Silin V, Lösche M. 2020. Association of Model Neurotransmitters with Lipid Bilayer Membranes. Biophysical journal 118(5): 1044-1057. DOI: 10.1016/j.bpj.2020.01.016
HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions.
Easterhoff D, Pollara J, Luo K, Janus B, Gohain N, Williams LD, Tay MZ, Monroe A, Peachman K, Choe M, et al. 2020. HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions. JCI insight 5(2): . DOI: 10.1172/jci.insight.131437
The mitochondrial HSP90 paralog TRAP1 forms an OXPHOS-regulated tetramer and is involved in mitochondrial metabolic homeostasis.
Joshi A, Dai L, Liu Y, Lee J, Ghahhari NM, Segala G, Beebe K, Jenkins LM, Lyons GC, Bernasconi L, et al. 2020. The mitochondrial HSP90 paralog TRAP1 forms an OXPHOS-regulated tetramer and is involved in mitochondrial metabolic homeostasis. BMC biology 18(1): 10. DOI: 10.1186/s12915-020-0740-7
Redox-Channeling Polydopamine-Ferrocene (PDA-Fc) Coating To Confer Context-Dependent and Photothermal Antimicrobial Activities.
Song J, Liu H, Lei M, Tan H, Chen Z, Antoshin A, Payne GF, Qu X, Liu C, Song J, Liu H, Lei M, Tan H, Chen Z, Antoshin A, Payne GF, Qu X, Liu C. 2020. Redox-Channeling Polydopamine-Ferrocene (PDA-Fc) Coating To Confer Context-Dependent and Photothermal Antimicrobial Activities. ACS applied materials & interfaces 12(7): 8915-8928. DOI: 10.1021/acsami.9b22339
Identification and characterization of fragment binding sites for allosteric ligand design using the site identification by ligand competitive saturation hotspots approach (SILCS-Hotspots).
MacKerell AD, Jo S, Lakkaraju SK, Lind C, Yu W, MacKerell AD, Jo S, Lakkaraju SK, Lind C, Yu W. 2020. Identification and characterization of fragment binding sites for allosteric ligand design using the site identification by ligand competitive saturation hotspots approach (SILCS-Hotspots). Biochimica et biophysica acta. General subjects 1864(4): 129519. DOI: 10.1016/j.bbagen.2020.129519
Unwinding 20 Years of the Archaeal Minichromosome Maintenance Helicase.
Kelman LM, O'Dell WB, Kelman Z, Kelman LM, O'Dell WB, Kelman Z. 2020. Unwinding 20 Years of the Archaeal Minichromosome Maintenance Helicase. Journal of bacteriology 202(6): . DOI: 10.1128/JB.00729-19
Structure of the cell-binding component of the Clostridium difficile binary toxin reveals a di-heptamer macromolecular assembly.
Xu X, Godoy-Ruiz R, Adipietro KA, Peralta C, Ben-Hail D, Varney KM, Cook ME, Roth BM, Wilder PT, Cleveland T, et al. 2020. Structure of the cell-binding component of the <i>Clostridium difficile</i> binary toxin reveals a di-heptamer macromolecular assembly. Proceedings of the National Academy of Sciences of the United States of America 117(2): 1049-1058. DOI: 10.1073/pnas.1919490117
Chemometric Outlier Classification of 2D-NMR Spectra to Enable Higher Order Structure Characterization of Protein Therapeutics.
Sheen DA, Shen VK, Brinson RG, Arbogast LW, Marino JP, Delaglio F, Sheen DA, Shen VK, Brinson RG, Arbogast LW, Marino JP, Delaglio F. 2020. Chemometric Outlier Classification of 2D-NMR Spectra to Enable Higher Order Structure Characterization of Protein Therapeutics. Chemometrics and intelligent laboratory systems : an international journal sponsored by the Chemometrics Society 199: . DOI: 10.1016/j.chemolab.2020.103973
Magnetic Resonance Relaxometry for Determination of Protein Concentration and Aggregation.
Taraban MB, Briggs KT, Yu YB, Taraban MB, Briggs KT, Yu YB. 2020. Magnetic Resonance Relaxometry for Determination of Protein Concentration and Aggregation. Current protocols in protein science 99(1): e102. DOI: 10.1002/cpps.102
The structural basis of T-cell receptor (TCR) activation: An enduring enigma.
Mariuzza RA, Agnihotri P, Orban J, Mariuzza RA, Agnihotri P, Orban J. 2020. The structural basis of T-cell receptor (TCR) activation: An enduring enigma. The Journal of biological chemistry 295(4): 914-925. DOI: 10.1074/jbc.REV119.009411
Microsystems for biofilm characterization and sensing - A review.
Subramanian S, Huiszoon RC, Chu S, Bentley WE, Ghodssi R, Subramanian S, Huiszoon RC, Chu S, Bentley WE, Ghodssi R. 2020. Microsystems for biofilm characterization and sensing - A review. Biofilm 2: 100015. DOI: 10.1016/j.bioflm.2019.100015
Melanin Produced by the Fast-Growing Marine Bacterium Vibrio natriegens through Heterologous Biosynthesis: Characterization and Application.
Wang Z, Tschirhart T, Schultzhaus Z, Kelly EE, Chen A, Oh E, Nag O, Glaser ER, Kim E, Lloyd PF, et al. 2020. Melanin Produced by the Fast-Growing Marine Bacterium Vibrio natriegens through Heterologous Biosynthesis: Characterization and Application. Applied and environmental microbiology 86(5): . DOI: 10.1128/AEM.02749-19
Redox Activities of Melanins Investigated by Electrochemical Reverse Engineering: Implications for their Roles in Oxidative Stress.
Kim E, Panzella L, Napolitano A, Payne GF, Kim E, Panzella L, Napolitano A, Payne GF. 2020. Redox Activities of Melanins Investigated by Electrochemical Reverse Engineering: Implications for their Roles in Oxidative Stress. The Journal of investigative dermatology 140(3): 537-543. DOI: 10.1016/j.jid.2019.09.010