Publications

Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress.
Karade SS, Pandey S, Ansari A, Das S, Tripathi S, Arora A, Chopra S, Pratap JV, Dasgupta A, Karade SS, Pandey S, Ansari A, Das S, Tripathi S, Arora A, Chopra S, Pratap JV, Dasgupta A. 2019. Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress. Biochimica et biophysica acta. Proteins and proteomics 1867(3): 317-330. DOI: 10.1016/j.bbapap.2018.10.011
Comparative transcriptome analysis of Poncirus trifoliata identifies a core set of genes involved in arbuscular mycorrhizal symbiosis.
An J, Sun M, van Velzen R, Ji C, Zheng Z, Limpens E, Bisseling T, Deng X, Xiao S, Pan Z, An J, Sun M, van Velzen R, Ji C, Zheng Z, Limpens E, Bisseling T, Deng X, Xiao S, Pan Z. 2018. Comparative transcriptome analysis of Poncirus trifoliata identifies a core set of genes involved in arbuscular mycorrhizal symbiosis. Journal of experimental botany 69(21): 5255-5264. DOI: 10.1093/jxb/ery283
Tobacco Mosaic Virus as a Versatile Platform for Molecular Assembly and Device Fabrication.
Chu S, Brown AD, Culver JN, Ghodssi R, Chu S, Brown AD, Culver JN, Ghodssi R. 2018. Tobacco Mosaic Virus as a Versatile Platform for Molecular Assembly and Device Fabrication. Biotechnology journal 13(12): e1800147. DOI: 10.1002/biot.201800147
Flexible Platform for In Situ Impedimetric Detection and Bioelectric Effect Treatment of Escherichia Coli Biofilms.
Huiszoon RC, Subramanian S, Ramiah Rajasekaran P, Beardslee LA, Bentley WE, Ghodssi R, Huiszoon RC, Subramanian S, Ramiah Rajasekaran P, Beardslee LA, Bentley WE, Ghodssi R. 2019. Flexible Platform for In Situ Impedimetric Detection and Bioelectric Effect Treatment of Escherichia Coli Biofilms. IEEE transactions on bio-medical engineering 66(5): 1337-1345. DOI: 10.1109/TBME.2018.2872896
Structural basis for broad neutralization of ebolaviruses by an antibody targeting the glycoprotein fusion loop.
Janus BM, van Dyk N, Zhao X, Howell KA, Soto C, Aman MJ, Li Y, Fuerst TR, Ofek G, Janus BM, van Dyk N, Zhao X, Howell KA, Soto C, Aman MJ, Li Y, Fuerst TR, Ofek G. 2018. Structural basis for broad neutralization of ebolaviruses by an antibody targeting the glycoprotein fusion loop. Nature communications 9(1): 3934. DOI: 10.1038/s41467-018-06113-4
Comparative genome analyses reveal sequence features reflecting distinct modes of host-adaptation between dicot and monocot powdery mildew.
Wu Y, Ma X, Pan Z, Kale SD, Song Y, King H, Zhang Q, Presley C, Deng X, Wei CI, et al. 2018. Comparative genome analyses reveal sequence features reflecting distinct modes of host-adaptation between dicot and monocot powdery mildew. BMC genomics 19(1): 705. DOI: 10.1186/s12864-018-5069-z
Sibling rivalry: Males with more brothers develop larger testes.
Fisher HS, Hook KA, Weber WD, Hoekstra HE, Fisher HS, Hook KA, Weber WD, Hoekstra HE. 2018. Sibling rivalry: Males with more brothers develop larger testes. Ecology and evolution 8(16): 8197-8203. DOI: 10.1002/ece3.4337
Identification of amino acid residues critical for the B cell growth-promoting activity of HIV-1 matrix protein p17 variants.
He W, Mazzuca P, Yuan W, Varney K, Bugatti A, Cagnotto A, Giagulli C, Rusnati M, Marsico S, Diomede L, et al. 2019. Identification of amino acid residues critical for the B cell growth-promoting activity of HIV-1 matrix protein p17 variants. Biochimica et biophysica acta. General subjects 1863(1): 13-24. DOI: 10.1016/j.bbagen.2018.09.016
Supplemental Oxygen Protects Heart Against Acute Myocardial Infarction.
Prabhat AM, Kuppusamy ML, Naidu SK, Meduru S, Reddy PT, Dominic A, Khan M, Rivera BK, Kuppusamy P, Prabhat AM, Kuppusamy ML, Naidu SK, Meduru S, Reddy PT, Dominic A, Khan M, Rivera BK, Kuppusamy P. 2018. Supplemental Oxygen Protects Heart Against Acute Myocardial Infarction. Frontiers in cardiovascular medicine 5: 114. DOI: 10.3389/fcvm.2018.00114
Structure of the Fc fragment of the NIST reference antibody RM8671.
Gallagher DT, Galvin CV, Karageorgos I, Gallagher DT, Galvin CV, Karageorgos I. 2018. Structure of the Fc fragment of the NIST reference antibody RM8671. Acta crystallographica. Section F, Structural biology communications 74(Pt 9): 524-529. DOI: 10.1107/S2053230X18009834
An activating mutation of the NSD2 histone methyltransferase drives oncogenic reprogramming in acute lymphocytic leukemia.
Swaroop A, Oyer JA, Will CM, Huang X, Yu W, Troche C, Bulic M, Durham BH, Wen QJ, Crispino JD, et al. 2019. An activating mutation of the NSD2 histone methyltransferase drives oncogenic reprogramming in acute lymphocytic leukemia. Oncogene 38(5): 671-686. DOI: 10.1038/s41388-018-0474-y
An immune magnetic nano-assembly for specifically amplifying intercellular quorum sensing signals.
Guan Y, Tsao CY, Quan DN, Li Y, Mei L, Zhang J, Zhang B, Liu Y, Bentley WE, Payne GF, et al. 2018. An immune magnetic nano-assembly for specifically amplifying intercellular quorum sensing signals. Colloids and surfaces. B, Biointerfaces 172: 197-206. DOI: 10.1016/j.colsurfb.2018.08.033
Comment on "Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water".
Best RB, Zheng W, Borgia A, Buholzer K, Borgia MB, Hofmann H, Soranno A, Nettels D, Gast K, Grishaev A, et al. 2018. Comment on "Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water". Science (New York, N.Y.) 361(6405): . DOI: 10.1126/science.aar7101
A new design for an artificial cell: polymer microcapsules with addressable inner compartments that can harbor biomolecules, colloids or microbial species.
Lu AX, Oh H, Terrell JL, Bentley WE, Raghavan SR, Lu AX, Oh H, Terrell JL, Bentley WE, Raghavan SR. 2017. A new design for an artificial cell: polymer microcapsules with addressable inner compartments that can harbor biomolecules, colloids or microbial species. Chemical science 8(10): 6893-6903. DOI: 10.1039/c7sc01335c
Structural metamorphism and polymorphism in proteins on the brink of thermodynamic stability.
Kulkarni P, Solomon TL, He Y, Chen Y, Bryan PN, Orban J, Kulkarni P, Solomon TL, He Y, Chen Y, Bryan PN, Orban J. 2018. Structural metamorphism and polymorphism in proteins on the brink of thermodynamic stability. Protein science : a publication of the Protein Society 27(9): 1557-1567. DOI: 10.1002/pro.3458
Peptide-MHC (pMHC) binding to a human antiviral T cell receptor induces long-range allosteric communication between pMHC- and CD3-binding sites.
Rangarajan S, He Y, Chen Y, Kerzic MC, Ma B, Gowthaman R, Pierce BG, Nussinov R, Mariuzza RA, Orban J, Rangarajan S, He Y, Chen Y, Kerzic MC, Ma B, Gowthaman R, Pierce BG, Nussinov R, Mariuzza RA, Orban J. 2018. Peptide-MHC (pMHC) binding to a human antiviral T cell receptor induces long-range allosteric communication between pMHC- and CD3-binding sites. The Journal of biological chemistry 293(41): 15991-16005. DOI: 10.1074/jbc.RA118.003832
IgG3 regulates tissue-like memory B cells in HIV-infected individuals.
Kardava L, Sohn H, Youn C, Austin JW, Wang W, Buckner CM, Justement JS, Melson VA, Roth GE, Hand MA, et al. 2018. IgG3 regulates tissue-like memory B cells in HIV-infected individuals. Nature immunology 19(9): 1001-1012. DOI: 10.1038/s41590-018-0180-5
Loss of S100A1 expression leads to Ca2+ release potentiation in mutant mice with disrupted CaM and S100A1 binding to CaMBD2 of RyR1.
Hernández-Ochoa EO, Melville Z, Vanegas C, Varney KM, Wilder PT, Melzer W, Weber DJ, Schneider MF, Hernández-Ochoa EO, Melville Z, Vanegas C, Varney KM, Wilder PT, Melzer W, Weber DJ, Schneider MF. 2018. Loss of S100A1 expression leads to Ca2+ release potentiation in mutant mice with disrupted CaM and S100A1 binding to CaMBD2 of RyR1. Physiological reports 6(15): e13822. DOI: 10.14814/phy2.13822
Proteomic Toolbox To Standardize the Separation of Extracellular Vesicles and Lipoprotein Particles.
Wang T, Turko IV, Wang T, Turko IV. 2018. Proteomic Toolbox To Standardize the Separation of Extracellular Vesicles and Lipoprotein Particles. Journal of proteome research 17(9): 3104-3113. DOI: 10.1021/acs.jproteome.8b00225
Platform development for expression and purification of stable isotope labeled monoclonal antibodies in Escherichia coli.
Reddy PT, Brinson RG, Hoopes JT, McClung C, Ke N, Kashi L, Berkmen M, Kelman Z, Reddy PT, Brinson RG, Hoopes JT, McClung C, Ke N, Kashi L, Berkmen M, Kelman Z. 2018. Platform development for expression and purification of stable isotope labeled monoclonal antibodies in Escherichia coli. mAbs 10(7): 992-1002. DOI: 10.1080/19420862.2018.1496879