Publications

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Structural and functional impact of cancer-related missense somatic mutations.
Shi Z, Moult J. 2011. Structural and functional impact of cancer-related missense somatic mutations. Journal of molecular biology 413(2): 495-512. DOI: 10.1016/j.jmb.2011.06.046
Effects on membrane lateral pressure suggest permeation mechanisms for bacterial quorum signaling molecules.
Kamaraju K, Smith J, Wang J, Roy V, Sintim HO, Bentley WE, Sukharev S. 2011. Effects on membrane lateral pressure suggest permeation mechanisms for bacterial quorum signaling molecules. Biochemistry 50(32): 6983-93. DOI: 10.1021/bi200684z
Synthesis and biological evaluations of putative metabolically stable analogs of VN/124-1 (TOK-001): head to head anti-tumor efficacy evaluation of VN/124-1 (TOK-001) and abiraterone in LAPC-4 human prostate cancer xenograft model.
Bruno RD, Vasaitis TS, Gediya LK, Purushottamachar P, Godbole AM, Ates-Alagoz Z, Brodie AM, Njar VC. 2011. Synthesis and biological evaluations of putative metabolically stable analogs of VN/124-1 (TOK-001): head to head anti-tumor efficacy evaluation of VN/124-1 (TOK-001) and abiraterone in LAPC-4 human prostate cancer xenograft model. Steroids 76(12): 1268-79. DOI: 10.1016/j.steroids.2011.06.002
Two functional S100A4 monomers are necessary for regulating nonmuscle myosin-IIA and HCT116 cell invasion.
House RP, Pozzuto M, Patel P, Dulyaninova NG, Li ZH, Zencheck WD, Vitolo MI, Weber DJ, Bresnick AR. 2011. Two functional S100A4 monomers are necessary for regulating nonmuscle myosin-IIA and HCT116 cell invasion. Biochemistry 50(32): 6920-32. DOI: 10.1021/bi200498q
Biofabrication of chitosan-silver composite SERS substrates enabling quantification of adenine by a spectroscopic shift.
Luo XL, Buckhout-White S, Bentley WE, Rubloff GW. 2011. Biofabrication of chitosan-silver composite SERS substrates enabling quantification of adenine by a spectroscopic shift. Biofabrication 3(3): 034108. DOI: 10.1088/1758-5082/3/3/034108
Mechanism of neutralization by the broadly neutralizing HIV-1 monoclonal antibody VRC01.
Li Y, O'Dell S, Walker LM, Wu X, Guenaga J, Feng Y, Schmidt SD, McKee K, Louder MK, Ledgerwood JE, et al. 2011. Mechanism of neutralization by the broadly neutralizing HIV-1 monoclonal antibody VRC01. Journal of virology 85(17): 8954-67. DOI: 10.1128/JVI.00754-11
Mass spectrometry characterization for chemoenzymatic glycoprotein synthesis.
Schiel JE, Lowenthal MS, Phinney KW. 2011. Mass spectrometry characterization for chemoenzymatic glycoprotein synthesis. Journal of mass spectrometry : JMS 46(7): 649-57. DOI: 10.1002/jms.1934
Extension of a three-helix bundle domain of myosin VI and key role of calmodulins.
Liu Y, Hsin J, Kim H, Selvin PR, Schulten K. 2011. Extension of a three-helix bundle domain of myosin VI and key role of calmodulins. Biophysical journal 100(12): 2964-73. DOI: 10.1016/j.bpj.2011.05.010
Molecular basis of a million-fold affinity maturation process in a protein-protein interaction.
Bonsor DA, Postel S, Pierce BG, Wang N, Zhu P, Buonpane RA, Weng Z, Kranz DM, Sundberg EJ. 2011. Molecular basis of a million-fold affinity maturation process in a protein-protein interaction. Journal of molecular biology 411(2): 321-8. DOI: 10.1016/j.jmb.2011.06.009
Microfluidic electrochemical sensor array for characterizing protein interactions with various functionalized surfaces.
Dykstra PH, Roy V, Byrd C, Bentley WE, Ghodssi R. 2011. Microfluidic electrochemical sensor array for characterizing protein interactions with various functionalized surfaces. Analytical chemistry 83(15): 5920-7. DOI: 10.1021/ac200835s
Biocompatible multi-address 3D cell assembly in microfluidic devices using spatially programmable gel formation.
Cheng Y, Luo X, Tsao CY, Wu HC, Betz J, Payne GF, Bentley WE, Rubloff GW. 2011. Biocompatible multi-address 3D cell assembly in microfluidic devices using spatially programmable gel formation. Lab on a chip 11(14): 2316-8. DOI: 10.1039/c1lc20306a
An extensive network of information flow through the B1b/c intersubunit bridge of the yeast ribosome.
Rhodin MH, Dinman JD. 2011. An extensive network of information flow through the B1b/c intersubunit bridge of the yeast ribosome. PloS one 6(5): e20048. DOI: 10.1371/journal.pone.0020048
Identification and quantification of DNA repair proteins by liquid chromatography/isotope-dilution tandem mass spectrometry using their fully 15N-labeled analogues as internal standards.
Dizdaroglu M, Reddy PT, Jaruga P. 2011. Identification and quantification of DNA repair proteins by liquid chromatography/isotope-dilution tandem mass spectrometry using their fully 15N-labeled analogues as internal standards. Journal of proteome research 10(8): 3802-13. DOI: 10.1021/pr200269j
Fluorinated paramagnetic chelates as potential multi-chromic 19F tracer agents.
Jiang ZX, Feng Y, Yu YB. 2011. Fluorinated paramagnetic chelates as potential multi-chromic 19F tracer agents. Chemical communications (Cambridge, England) 47(25): 7233-5. DOI: 10.1039/c1cc11150g
A rapid, inexpensive yeast-based dual-fluorescence assay of programmed--1 ribosomal frameshifting for high-throughput screening.
Rakauskaite R, Liao PY, Rhodin MH, Lee K, Dinman JD. 2011. A rapid, inexpensive yeast-based dual-fluorescence assay of programmed--1 ribosomal frameshifting for high-throughput screening. Nucleic acids research 39(14): e97. DOI: 10.1093/nar/gkr382