Publications

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Profound asymmetry in the structure of the cAMP-free cAMP Receptor Protein (CRP) from Mycobacterium tuberculosis.
Gallagher DT, Smith N, Kim SK, Robinson H, Reddy PT. 2009. Profound asymmetry in the structure of the cAMP-free cAMP Receptor Protein (CRP) from Mycobacterium tuberculosis. The Journal of biological chemistry 284(13): 8228-32. DOI: 10.1074/jbc.C800215200
Towards area-based in vitro metabolic engineering: assembly of Pfs enzyme onto patterned microfabricated chips.
Lewandowski AT, Bentley WE, Yi H, Rubloff GW, Payne GF, Ghodssi R. 2022. Towards area-based in vitro metabolic engineering: assembly of Pfs enzyme onto patterned microfabricated chips. Biotechnology progress 24(5): 1042-51. DOI: 10.1002/btpr.44
Combined use of mass spectrometry and heterologous expression for identification of membrane-interacting peptides in cytochrome P450 46A1 and NADPH-cytochrome P450 oxidoreductase.
Mast N, Liao WL, Pikuleva IA, Turko IV. 2009. Combined use of mass spectrometry and heterologous expression for identification of membrane-interacting peptides in cytochrome P450 46A1 and NADPH-cytochrome P450 oxidoreductase. Archives of biochemistry and biophysics 483(1): 81-9. DOI: 10.1016/j.abb.2009.01.002
Preparation of silica stabilized Tobacco mosaic virus templates for the production of metal and layered nanoparticles.
Royston ES, Brown AD, Harris MT, Culver JN. 2009. Preparation of silica stabilized Tobacco mosaic virus templates for the production of metal and layered nanoparticles. Journal of colloid and interface science 332(2): 402-7. DOI: 10.1016/j.jcis.2008.12.064
The Biomolecular Crystallization Database Version 4: expanded content and new features.
Tung M, Gallagher DT. 2009. The Biomolecular Crystallization Database Version 4: expanded content and new features. Acta crystallographica. Section D, Biological crystallography 65(Pt 1): 18-23. DOI: 10.1107/S0907444908035440
Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule.
Li Y, Cao C, Jia W, Yu L, Mo M, Wang Q, Huang Y, Lim JM, Ishihara M, Wells L, et al. 2009. Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule. The EMBO journal 28(3): 286-97. DOI: 10.1038/emboj.2008.288
Discovery of indoline-based, natural-product-like compounds as probes of focal adhesion kinase signaling pathways.
Poondra RR, Kumar NN, Bijian K, Prakesch M, Campagna-Slater V, Reayi A, Reddy PT, Choudhry A, Barnes ML, Leek DM, et al. 2009. Discovery of indoline-based, natural-product-like compounds as probes of focal adhesion kinase signaling pathways. Journal of combinatorial chemistry 11(2): 303-9. DOI: 10.1021/cc8001525
Microbial nar-GFP cell sensors reveal oxygen limitations in highly agitated and aerated laboratory-scale fermentors.
Garcia JR, Cha HJ, Rao G, Marten MR, Bentley WE. 2009. Microbial nar-GFP cell sensors reveal oxygen limitations in highly agitated and aerated laboratory-scale fermentors. Microbial cell factories 8: 6. DOI: 10.1186/1475-2859-8-6
How is the archaeal MCM helicase assembled at the origin? Possible mechanisms.
Sakakibara N, Kelman LM, Kelman Z. 2009. How is the archaeal MCM helicase assembled at the origin? Possible mechanisms. Biochemical Society transactions 37(Pt 1): 7-11. DOI: 10.1042/BST0370007
Use of a bacteriophage lysin, PlyC, as an enzyme disinfectant against Streptococcus equi.
Hoopes JT, Stark CJ, Kim HA, Sussman DJ, Donovan DM, Nelson DC. 2009. Use of a bacteriophage lysin, PlyC, as an enzyme disinfectant against Streptococcus equi. Applied and environmental microbiology 75(5): 1388-94. DOI: 10.1128/AEM.02195-08
Structure and function of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member.
Narayanan B, Niu W, Joosten HJ, Li Z, Kuipers RK, Schaap PJ, Dunaway-Mariano D, Herzberg O. 2009. Structure and function of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member. Journal of molecular biology 386(2): 486-503. DOI: 10.1016/j.jmb.2008.12.037
Orthogonal enzymatic reactions for the assembly of proteins at electrode addresses.
Yang X, Shi XW, Liu Y, Bentley WE, Payne GF. 2009. Orthogonal enzymatic reactions for the assembly of proteins at electrode addresses. Langmuir : the ACS journal of surfaces and colloids 25(1): 338-44. DOI: 10.1021/la802618q
The Coffey Lecture: steroidogenic enzyme inhibitors and hormone dependent cancer.
Brodie A, Njar V, Macedo LF, Vasaitis TS, Sabnis G. 2022. The Coffey Lecture: steroidogenic enzyme inhibitors and hormone dependent cancer. Urologic oncology 27(1): 53-63. DOI: 10.1016/j.urolonc.2008.07.036
Cloning, Purification, and Partial Characterization of the Halobacterium sp. NRC-1 Minichromosome Maintenance (MCM) Helicase.
Sakakibara N, Han M, Rollor CR, Gilson RC, Busch C, Heo G, Kelman Z. 2008. Cloning, Purification, and Partial Characterization of the Halobacterium sp. NRC-1 Minichromosome Maintenance (MCM) Helicase. The open microbiology journal 2: 13-7. DOI: 10.2174/1874285800802010013
The trigger sequence in the GCN4 leucine zipper: alpha-helical propensity and multistate dynamics of folding and dimerization.
Chapagain PP, Liu Y, Gerstman BS. 2008. The trigger sequence in the GCN4 leucine zipper: alpha-helical propensity and multistate dynamics of folding and dimerization. The Journal of chemical physics 129(17): 175103. DOI: 10.1063/1.3006421