Publications

Rapid and Noninvasive Quantification of Capsid Gene Filling Level Using Water Proton Nuclear Magnetic Resonance.
Taraban MB, Jones MT, Yu YB, Taraban MB, Jones MT, Yu YB. 2021. Rapid and Noninvasive Quantification of Capsid Gene Filling Level Using Water Proton Nuclear Magnetic Resonance. Analytical chemistry 93(48): 15816-15820. DOI: 10.1021/acs.analchem.1c04088
Knockout of Anopheles stephensi immune gene LRIM1 by CRISPR-Cas9 reveals its unexpected role in reproduction and vector competence.
Inbar E, Eappen AG, Alford RT, Reid W, Harrell RA, Hosseini M, Chakravarty S, Li T, Sim BKL, Billingsley PF, et al. 2021. Knockout of Anopheles stephensi immune gene LRIM1 by CRISPR-Cas9 reveals its unexpected role in reproduction and vector competence. PLoS pathogens 17(11): e1009770. DOI: 10.1371/journal.ppat.1009770
DNA Dye Sytox Green in Detection of Bacteriolytic Activity: High Speed, Precision and Sensitivity Demonstrated With Endolysins.
Harhala M, Gembara K, Miernikiewicz P, Owczarek B, Kaźmierczak Z, Majewska J, Nelson DC, Dąbrowska K, Harhala M, Gembara K, Miernikiewicz P, Owczarek B, Kaźmierczak Z, Majewska J, Nelson DC, Dąbrowska K. 2021. DNA Dye Sytox Green in Detection of Bacteriolytic Activity: High Speed, Precision and Sensitivity Demonstrated With Endolysins. Frontiers in microbiology 12: 752282. DOI: 10.3389/fmicb.2021.752282
Fusing an insoluble protein to GroEL apical domain enhances soluble expression in Escherichia coli.
Reddy PT, O'Dell WB, Reddy PT, O'Dell WB. 2021. Fusing an insoluble protein to GroEL apical domain enhances soluble expression in Escherichia coli. Methods in enzymology 659: 171-188. DOI: 10.1016/bs.mie.2021.09.002
Preface.
Kelman Z, O'Dell WB, Kelman Z, O'Dell WB. 2021. Preface. Methods in enzymology 659: xix-xxiii. DOI: 10.1016/S0076-6879(21)00414-6
Structural insights into kinetoplastid coronin oligomerization domain and F-actin interaction.
Parihar PS, Singh A, Karade SS, Sahasrabuddhe AA, Pratap JV, Parihar PS, Singh A, Karade SS, Sahasrabuddhe AA, Pratap JV. 2021. Structural insights into <i>kinetoplastid</i> coronin oligomerization domain and F-actin interaction. Current research in structural biology 3: 268-276. DOI: 10.1016/j.crstbi.2021.10.002
Preface.
O'Dell WB, Kelman Z, O'Dell WB, Kelman Z. 2021. Preface. Methods in enzymology 660: xvii-xxii. DOI: 10.1016/S0076-6879(21)00449-3
Molecular Determinants of Filament Capping Proteins Required for the Formation of Functional Flagella in Gram-Negative Bacteria.
Nedeljković M, Postel S, Pierce BG, Sundberg EJ, Nedeljković M, Postel S, Pierce BG, Sundberg EJ. 2021. Molecular Determinants of Filament Capping Proteins Required for the Formation of Functional Flagella in Gram-Negative Bacteria. Biomolecules 11(10): . DOI: 10.3390/biom11101397
An Antigenically Diverse, Representative Panel of Envelope Glycoproteins for Hepatitis C Virus Vaccine Development.
Salas JH, Urbanowicz RA, Guest JD, Frumento N, Figueroa A, Clark KE, Keck Z, Cowton VM, Cole SJ, Patel AH, et al. 2021. An Antigenically Diverse, Representative Panel of Envelope Glycoproteins for Hepatitis C Virus Vaccine Development. Gastroenterology : . DOI: 10.1053/j.gastro.2021.10.005
One dose of COVID-19 nanoparticle vaccine REVC-128 protects against SARS-CoV-2 challenge at two weeks post-immunization.
Gu M, Torres JL, Li Y, Van Ry A, Greenhouse J, Wallace S, Chiang CI, Pessaint L, Jackson AM, Porto M, et al. 2021. One dose of COVID-19 nanoparticle vaccine REVC-128 protects against SARS-CoV-2 challenge at two weeks post-immunization. Emerging microbes & infections 10(1): 2016-2029. DOI: 10.1080/22221751.2021.1994354
All vials are not the same: Potential role of vaccine quality in vaccine adverse reactions.
Bruce Yu Y, Taraban MB, Briggs KT, Bruce Yu Y, Taraban MB, Briggs KT. 2021. All vials are not the same: Potential role of vaccine quality in vaccine adverse reactions. Vaccine 39(45): 6565-6569. DOI: 10.1016/j.vaccine.2021.09.065
Sulforaphane covalently interacts with the transglutaminase 2 cancer maintenance protein to alter its structure and suppress its activity.
Rorke EA, Adhikary G, Szmacinski H, Lakowicz JR, Weber DJ, Godoy-Ruiz R, Puranik P, Keillor JW, Gates EWJ, Eckert RL, Rorke EA, Adhikary G, Szmacinski H, Lakowicz JR, Weber DJ, Godoy-Ruiz R, Puranik P, Keillor JW, Gates EWJ, Eckert RL. 2022. Sulforaphane covalently interacts with the transglutaminase 2 cancer maintenance protein to alter its structure and suppress its activity. Molecular carcinogenesis 61(1): 19-32. DOI: 10.1002/mc.23356
Physiologically Relevant Free Ca2+ Ion Concentrations Regulate STRA6-Calmodulin Complex Formation via the BP2 Region of STRA6.
Young BD, Varney KM, Wilder PT, Costabile BK, Pozharski E, Cook ME, Godoy-Ruiz R, Clarke OB, Mancia F, Weber DJ, Young BD, Varney KM, Wilder PT, Costabile BK, Pozharski E, Cook ME, Godoy-Ruiz R, Clarke OB, Mancia F, Weber DJ. 2021. Physiologically Relevant Free Ca2+ Ion Concentrations Regulate STRA6-Calmodulin Complex Formation via the BP2 Region of STRA6. Journal of molecular biology 433(22): 167272. DOI: 10.1016/j.jmb.2021.167272
3D-Printed electrochemical sensor-integrated transwell systems.
Ramiah Rajasekaran P, Chapin AA, Quan DN, Herberholz J, Bentley WE, Ghodssi R, Ramiah Rajasekaran P, Chapin AA, Quan DN, Herberholz J, Bentley WE, Ghodssi R. 2020. 3D-Printed electrochemical sensor-integrated transwell systems. Microsystems & nanoengineering 6: 100. DOI: 10.1038/s41378-020-00208-z
Electrochemical measurement of serotonin by Au-CNT electrodes fabricated on microporous cell culture membranes.
Chapin AA, Rajasekaran PR, Quan DN, Hu L, Herberholz J, Bentley WE, Ghodssi R, Chapin AA, Rajasekaran PR, Quan DN, Hu L, Herberholz J, Bentley WE, Ghodssi R. 2020. Electrochemical measurement of serotonin by Au-CNT electrodes fabricated on microporous cell culture membranes. Microsystems & nanoengineering 6: 90. DOI: 10.1038/s41378-020-00184-4
Editorial overview: Bioanalytical tools, techniques, and trailblazers offer insight to drive bioprocess development.
Rosenberg JN, Bentley WE, Betenbaugh MJ, Rosenberg JN, Bentley WE, Betenbaugh MJ. 2021. Editorial overview: Bioanalytical tools, techniques, and trailblazers offer insight to drive bioprocess development. Current opinion in biotechnology 71: iii-vi. DOI: 10.1016/j.copbio.2021.09.001
Target highlights in CASP14: Analysis of models by structure providers.
Alexander LT, Lepore R, Kryshtafovych A, Adamopoulos A, Alahuhta M, Arvin AM, Bomble YJ, Böttcher B, Breyton C, Chiarini V, et al. 2021. Target highlights in CASP14: Analysis of models by structure providers. Proteins 89(12): 1647-1672. DOI: 10.1002/prot.26247
Association of acute psychosocial stress with oxidative stress: Evidence from serum analysis.
Kim E, Zhao Z, Rzasa JR, Glassman M, Bentley WE, Chen S, Kelly DL, Payne GF, Kim E, Zhao Z, Rzasa JR, Glassman M, Bentley WE, Chen S, Kelly DL, Payne GF. 2021. Association of acute psychosocial stress with oxidative stress: Evidence from serum analysis. Redox biology 47: 102138. DOI: 10.1016/j.redox.2021.102138
Critical assessment of methods of protein structure prediction (CASP)-Round XIV.
Kryshtafovych A, Schwede T, Topf M, Fidelis K, Moult J, Kryshtafovych A, Schwede T, Topf M, Fidelis K, Moult J. 2021. Critical assessment of methods of protein structure prediction (CASP)-Round XIV. Proteins 89(12): 1607-1617. DOI: 10.1002/prot.26237
Structural and energetic profiling of SARS-CoV-2 receptor binding domain antibody recognition and the impact of circulating variants.
Yin R, Guest JD, Taherzadeh G, Gowthaman R, Mittra I, Quackenbush J, Pierce BG, Yin R, Guest JD, Taherzadeh G, Gowthaman R, Mittra I, Quackenbush J, Pierce BG. 2021. Structural and energetic profiling of SARS-CoV-2 receptor binding domain antibody recognition and the impact of circulating variants. PLoS computational biology 17(9): e1009380. DOI: 10.1371/journal.pcbi.1009380