IBBR Publications

Found 243 results
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Guan R, Roychowdury A, Ember B, Kumar S, Boons G-J, Mariuzza RA. Crystal structure of a peptidoglycan recognition protein (PGRP) in complex with a muramyl tripeptide from Gram-positive bacteria. J Endotoxin Res. 2005 ;11(1):41-6.
Guan R, Wang Q, Sundberg EJ, Mariuzza RA. Crystal structure of human peptidoglycan recognition protein S (PGRP-S) at 1.70 A resolution. J Mol Biol. 2005 ;347(4):683-91.
Teplyakov A, Liu S, Lu Z, Howard A, Dunaway-Mariano D, Herzberg O. Crystal structure of the petal death protein from carnation flower. Biochemistry. 2005 ;44(50):16377-84.
Lim K, Doseeva V, Demirkan ESarikaya, Pullalarevu S, Krajewski W, Galkin A, Howard A, Herzberg O. Crystal structure of the YgfY from Escherichia coli, a protein that may be involved in transcriptional regulation. Proteins. 2005 ;58(3):759-63.
Liu S, Lu Z, Han Y, Melamud E, Dunaway-Mariano D, Herzberg O. Crystal structures of 2-methylisocitrate lyase in complex with product and with isocitrate inhibitor provide insight into lyase substrate specificity, catalysis and evolution. Biochemistry. 2005 ;44(8):2949-62.
Bryce DL, Grishaev A, Bax A. Measurement of ribose carbon chemical shift tensors for A-form RNA by liquid crystal NMR spectroscopy. J Am Chem Soc. 2005 ;127(20):7387-96.
Yeh DCheon, Parsons LM, Parsons JF, Liu F, Eisenstein E, Orban J. NMR structure of HI0004, a putative essential gene product from Haemophilus influenzae, and comparison with the X-ray structure of an Aquifex aeolicus homolog. Protein Sci. 2005 ;14(2):424-30.
Mintseris J, Wiehe K, Pierce BG, Anderson R, Chen R, Janin J, Weng Z. Protein-Protein Docking Benchmark 2.0: an update. Proteins. 2005 ;60(2):214-6.
He Y, Yeh DCheon, Alexander P, Bryan PN, Orban J. Solution NMR structures of IgG binding domains with artificially evolved high levels of sequence identity but different folds. Biochemistry. 2005 ;44(43):14055-61.
Huang N, Mackerell AD. Specificity in protein-DNA interactions: energetic recognition by the (cytosine-C5)-methyltransferase from HhaI. J Mol Biol. 2005 ;345(2):265-74.
Cho S, Swaminathan CP, Yang J, Kerzic MC, Guan R, Kieke MC, Kranz DM, Mariuzza RA, Sundberg EJ. Structural basis of affinity maturation and intramolecular cooperativity in a protein-protein interaction. Structure. 2005 ;13(12):1775-87.
Chen Y-J, Yu X, Kasiviswanathan R, Shin J-H, Kelman Z, Egelman EH. Structural polymorphism of Methanothermobacter thermautotrophicus MCM. J Mol Biol. 2005 ;346(2):389-94.
Lehmann C, Pullalarevu S, Krajewski W, Willis MA, Galkin A, Howard A, Herzberg O. Structure of HI0073 from Haemophilus influenzae, the nucleotide-binding domain of a two-protein nucleotidyl transferase. Proteins. 2005 ;60(4):807-11.
Willis MA, Song F, Zhuang Z, Krajewski W, Chalamasetty VRao, Reddy PT, Howard A, Dunaway-Mariano D, Herzberg O. Structure of YciI from Haemophilus influenzae (HI0828) reveals a ferredoxin-like alpha/beta-fold with a histidine/aspartate centered catalytic site. Proteins. 2005 ;59(3):648-52.