IBBR Publications

Found 243 results
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Eisenstein E, Gilliland GL, Herzberg O, Moult J, Orban J, Poljak RJ, Banerjei L, Richardson D, Howard AJ. Biological function made crystal clear - annotation of hypothetical proteins via structural genomics. Curr Opin Biotechnol. 2000 ;11(1):25-30.
Rubinson KA, Ladner JE, Tordova M, Gilliland GL. Cryosalts: suppression of ice formation in macromolecular crystallography. Acta Crystallogr D Biol Crystallogr. 2000 ;56(Pt 8):996-1001.
Toth EA, Worby C, Dixon JE, Goedken ER, Marqusee S, Yeates TO. The crystal structure of adenylosuccinate lyase from Pyrobaculum aerophilum reveals an intracellular protein with three disulfide bonds. J Mol Biol. 2000 ;301(2):433-50.
Natarajan K, Sawicki MW, Margulies DH, Mariuzza RA. Crystal structure of human CD69: a C-type lectin-like activation marker of hematopoietic cells. Biochemistry. 2000 ;39(48):14779-86.
Zhang H, Huang K, Li Z, Banerjei L, Fisher KE, Grishin NV, Eisenstein E, Herzberg O. Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications. Proteins. 2000 ;40(1):86-97.
Sundberg EJ, Urrutia M, Braden BC, Isern J, Tsuchiya D, Fields BA, Malchiodi EL, Tormo J, Schwarz FP, Mariuzza RA. Estimation of the hydrophobic effect in an antigen-antibody protein-protein interface. Biochemistry. 2000 ;39(50):15375-87.
Sundberg EJ, Mariuzza RA. Luxury accommodations: the expanding role of structural plasticity in protein-protein interactions. Structure. 2000 ;8(7):R137-42.
Chou JJ, Delaglio F, Bax A. Measurement of one-bond 15N-13C' dipolar couplings in medium sized proteins. J Biomol NMR. 2000 ;18(2):101-5.
Werner RM, Jiang YL, Gordley RG, Jagadeesh GJ, Ladner JE, Xiao G, Tordova M, Gilliland GL, Stivers JT. Stressing-out DNA? The contribution of serine-phosphodiester interactions in catalysis by uracil DNA glycosylase. Biochemistry. 2000 ;39(41):12585-94.
Li Y, Li H, Martin R, Mariuzza RA. Structural basis for the binding of an immunodominant peptide from myelin basic protein in different registers by two HLA-DR2 proteins. J Mol Biol. 2000 ;304(2):177-88.
Toth EA, Yeates TO. The structure of adenylosuccinate lyase, an enzyme with dual activity in the de novo purine biosynthetic pathway. Structure. 2000 ;8(2):163-74.
Altieri AS, Mazzulla MJ, Horita DA, Coats RH, Wingfield PT, Das A, Court DL, Byrd RA. The structure of the transcriptional antiterminator NusB from Escherichia coli. Nat Struct Biol. 2000 ;7(6):470-4.
Li Y, Li H, Smith-Gill SJ, Mariuzza RA. Three-dimensional structures of the free and antigen-bound Fab from monoclonal antilysozyme antibody HyHEL-63(,). Biochemistry. 2000 ;39(21):6296-309.
Wilkinson KD, Laleli-Sahin E, Urbauer J, Larsen CN, Shih GH, Haas AL, Walsh STR, Wand AJ. The binding site for UCH-L3 on ubiquitin: mutagenesis and NMR studies on the complex between ubiquitin and UCH-L3. J Mol Biol. 1999 ;291(5):1067-77.
Moult J, Hubbard T, Fidelis K, Pedersen JT. Critical assessment of methods of protein structure prediction (CASP): round III. Proteins. 1999 ;Suppl 3:2-6.
Tormo J, Natarajan K, Margulies DH, Mariuzza RA. Crystal structure of a lectin-like natural killer cell receptor bound to its MHC class I ligand. Nature. 1999 ;402(6762):623-31.
Suzuki M, Saxena SK, Boix E, Prill RJ, Vasandani VM, Ladner JE, Sung C, Youle RJ. Engineering receptor-mediated cytotoxicity into human ribonucleases by steric blockade of inhibitor interaction. Nat Biotechnol. 1999 ;17(3):265-70.
Huang K, Li Z, Jia Y, Dunaway-Mariano D, Herzberg O. Helix swapping between two alpha/beta barrels: crystal structure of phosphoenolpyruvate mutase with bound Mg(2+)-oxalate. Structure. 1999 ;7(5):539-48.
Oliva MT, Moult J. Local electrostatic optimization in proteins. Protein Eng. 1999 ;12(9):727-35.
Natarajan K, Li H, Mariuzza RA, Margulies DH. MHC class I molecules, structure and function. Rev Immunogenet. 1999 ;1(1):32-46.
Chen CC, Herzberg O. Relocation of the catalytic carboxylate group in class A beta-lactamase: the structure and function of the mutant enzyme Glu166-->Gln:Asn170-->Asp. Protein Eng. 1999 ;12(7):573-9.
Britton KL, Yip KS, Sedelnikova SE, Stillman TJ, Adams MW, Ma K, Maeder DL, Robb FT, Tolliday N, Vetriani C, et al. Structure determination of the glutamate dehydrogenase from the hyperthermophile Thermococcus litoralis and its comparison with that from Pyrococcus furiosus. J Mol Biol. 1999 ;293(5):1121-32.
Ladner JE, Abdulaev NG, Kakuev DL, Tordova M, Ridge KD, Gilliland GL. The three-dimensional structures of two isoforms of nucleoside diphosphate kinase from bovine retina. Acta Crystallogr D Biol Crystallogr. 1999 ;55(Pt 6):1127-35.