IBBR Publications

Found 258 results
Filters: Keyword is Binding Sites  [Clear All Filters]
Turko IV, Ballard SA, Francis SH, Corbin JD. Inhibition of cyclic GMP-binding cyclic GMP-specific phosphodiesterase (Type 5) by sildenafil and related compounds. Mol Pharmacol. 1999 ;56(1):124-30.
Ruan B, Hoskins J, Bryan PN. Rapid folding of calcium-free subtilisin by a stabilized pro-domain mutant. Biochemistry. 1999 ;38(26):8562-71.
Garbuglia M, Verzini M, Rustandi RR, Osterloh D, Weber DJ, Gerke V, Donato R. Role of the C-terminal extension in the interaction of S100A1 with GFAP, tubulin, the S100A1- and S100B-inhibitory peptide, TRTK-12, and a peptide derived from p53, and the S100A1 inhibitory effect on GFAP polymerization. Biochem Biophys Res Commun. 1999 ;254(1):36-41.
Li Z, Rasmussen BA, Herzberg O. Structural consequences of the active site substitution Cys181 ==> Ser in metallo-beta-lactamase from Bacteroides fragilis. Protein Sci. 1999 ;8(1):249-52.
Britton KL, Yip KS, Sedelnikova SE, Stillman TJ, Adams MW, Ma K, Maeder DL, Robb FT, Tolliday N, Vetriani C, et al. Structure determination of the glutamate dehydrogenase from the hyperthermophile Thermococcus litoralis and its comparison with that from Pyrococcus furiosus. J Mol Biol. 1999 ;293(5):1121-32.
Turko IV, Francis SH, Corbin JD. Studies of the molecular mechanism of discrimination between cGMP and cAMP in the allosteric sites of the cGMP-binding cGMP-specific phosphodiesterase (PDE5). J Biol Chem. 1999 ;274(41):29038-41.
Ladner JE, Abdulaev NG, Kakuev DL, Tordova M, Ridge KD, Gilliland GL. The three-dimensional structures of two isoforms of nucleoside diphosphate kinase from bovine retina. Acta Crystallogr D Biol Crystallogr. 1999 ;55(Pt 6):1127-35.
Kelman Z, Yuzhakov A, Andjelkovic J, O'Donnell M. Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly. EMBO J. 1998 ;17(8):2436-49.
McGuire M, Huang K, Kapadia G, Herzberg O, Dunaway-Mariano D. Location of the phosphate binding site within Clostridium symbiosum pyruvate phosphate dikinase. Biochemistry. 1998 ;37(39):13463-74.
Leder L, Llera A, Lavoie PM, Lebedeva MI, Li H, Sékaly RP, Bohach GA, Gahr PJ, Schlievert PM, Karjalainen K, et al. A mutational analysis of the binding of staphylococcal enterotoxins B and C3 to the T cell receptor beta chain and major histocompatibility complex class II. J Exp Med. 1998 ;187(6):823-33.
Abdulaev NG, Karaschuk GN, Ladner JE, Kakuev DL, Yakhyaev AV, Tordova M, Gaidarov IO, Popov VI, Fujiwara JH, Chinchilla D, et al. Nucleoside diphosphate kinase from bovine retina: purification, subcellular localization, molecular cloning, and three-dimensional structure. Biochemistry. 1998 ;37(40):13958-67.
Corbin JD, Beasley A, Turko IV, Haik TL, Mangum KA, Wells JN, Francis SH, Sekhar KR. A photoaffinity probe covalently modifies the catalytic site of the cGMP-binding cGMP-specific phosphodiesterase (PDE-5). Cell Biochem Biophys. 1998 ;29(1-2):145-57.
Turko IV, Francis SH, Corbin JD. Potential roles of conserved amino acids in the catalytic domain of the cGMP-binding cGMP-specific phosphodiesterase. J Biol Chem. 1998 ;273(11):6460-6.
Kelman Z, Hurwitz J. Protein-PCNA interactions: a DNA-scanning mechanism?. Trends Biochem Sci. 1998 ;23(7):236-8.
Banerjee S, Pieper U, Kapadia G, Pannell LK, Herzberg O. Role of the omega-loop in the activity, substrate specificity, and structure of class A beta-lactamase. Biochemistry. 1998 ;37(10):3286-96.
Drohat AC, Baldisseri DM, Rustandi RR, Weber DJ. Solution structure of calcium-bound rat S100B(betabeta) as determined by nuclear magnetic resonance spectroscopy,. Biochemistry. 1998 ;37(9):2729-40.
Horita DA, Baldisseri DM, Zhang W, Altieri AS, Smithgall TE, Gmeiner WH, Byrd RA. Solution structure of the human Hck SH3 domain and identification of its ligand binding site. J Mol Biol. 1998 ;278(1):253-65.
Pieper U, Kapadia G, Mevarech M, Herzberg O. Structural features of halophilicity derived from the crystal structure of dihydrofolate reductase from the Dead Sea halophilic archaeon, Haloferax volcanii. Structure. 1998 ;6(1):75-88.
Zhu PP, Herzberg O, Peterkofsky A. Topography of the interaction of HPr(Ser) kinase with HPr. Biochemistry. 1998 ;37(34):11762-70.