IBBR Publications

Found 243 results
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1998
Ysern X, Li H, Mariuzza RA. Imperfect interfaces. Nat Struct Biol. 1998 ;5(6):412-4.
McGuire M, Huang K, Kapadia G, Herzberg O, Dunaway-Mariano D. Location of the phosphate binding site within Clostridium symbiosum pyruvate phosphate dikinase. Biochemistry. 1998 ;37(39):13463-74.
Dall'Acqua W, Goldman ER, Lin W, Teng C, Tsuchiya D, Li H, Ysern X, Braden BC, Li Y, Smith-Gill SJ, et al. A mutational analysis of binding interactions in an antigen-antibody protein-protein complex. Biochemistry. 1998 ;37(22):7981-91.
Abdulaev NG, Karaschuk GN, Ladner JE, Kakuev DL, Yakhyaev AV, Tordova M, Gaidarov IO, Popov VI, Fujiwara JH, Chinchilla D, et al. Nucleoside diphosphate kinase from bovine retina: purification, subcellular localization, molecular cloning, and three-dimensional structure. Biochemistry. 1998 ;37(40):13958-67.
Huang K, Kapadia G, Zhu PP, Peterkofsky A, Herzberg O. A promiscuous binding surface: crystal structure of the IIA domain of the glucose-specific permease from Mycoplasma capricolum. Structure. 1998 ;6(6):697-710.
Vetriani C, Maeder DL, Tolliday N, Yip KS, Stillman TJ, Britton KL, Rice DW, Klump HH, Robb FT. Protein thermostability above 100 degreesC: a key role for ionic interactions. Proc Natl Acad Sci U S A. 1998 ;95(21):12300-5.
Banerjee S, Pieper U, Kapadia G, Pannell LK, Herzberg O. Role of the omega-loop in the activity, substrate specificity, and structure of class A beta-lactamase. Biochemistry. 1998 ;37(10):3286-96.
Pieper U, Kapadia G, Mevarech M, Herzberg O. Structural features of halophilicity derived from the crystal structure of dihydrofolate reductase from the Dead Sea halophilic archaeon, Haloferax volcanii. Structure. 1998 ;6(1):75-88.
Li H, Lebedeva MI, Llera AS, Fields BA, Brenner MB, Mariuzza RA. Structure of the Vdelta domain of a human gammadelta T-cell antigen receptor. Nature. 1998 ;391(6666):502-6.
Li H, Natarajan K, Malchiodi EL, Margulies DH, Mariuzza RA. Three-dimensional structure of H-2Dd complexed with an immunodominant peptide from human immunodeficiency virus envelope glycoprotein 120. J Mol Biol. 1998 ;283(1):179-91.
Li H, Llera A, Tsuchiya D, Leder L, Ysern X, Schlievert PM, Karjalainen K, Mariuzza RA. Three-dimensional structure of the complex between a T cell receptor beta chain and the superantigen staphylococcal enterotoxin B. Immunity. 1998 ;9(6):807-16.
1996
Lebedeva MI, Fields BA, Spits H, Panchamoorthy G, Brenner MB, Mariuzza RA. Cloning, expression, and crystallization of the V delta domain of a human gamma delta T-cell receptor. Protein Sci. 1996 ;5(12):2638-42.
Fields BA, Malchiodi EL, Li H, Ysern X, Stauffacher CV, Schlievert PM, Karjalainen K, Mariuzza RA. Crystal structure of a T-cell receptor beta-chain complexed with a superantigen. Nature. 1996 ;384(6605):188-92.
Braden BC, Fields BA, Ysern X, Dall'Acqua W, Goldbaum FA, Poljak RJ, Mariuzza RA. Crystal structure of an Fv-Fv idiotope-anti-idiotope complex at 1.9 A resolution. J Mol Biol. 1996 ;264(1):137-51.
Braden BC, Fields BA, Ysern X, Goldbaum FA, Dall'Acqua W, Schwarz FP, Poljak RJ, Mariuzza RA. Crystal structure of the complex of the variable domain of antibody D1.3 and turkey egg white lysozyme: a novel conformational change in antibody CDR-L3 selects for antigen. J Mol Biol. 1996 ;257(5):889-94.
Concha NO, Rasmussen BA, Bush K, Herzberg O. Crystal structure of the wide-spectrum binuclear zinc beta-lactamase from Bacteroides fragilis. Structure. 1996 ;4(7):823-36.
Gilliland GL, Ladner JE. Crystallization of biological macromolecules for X-ray diffraction studies. Curr Opin Struct Biol. 1996 ;6(5):595-603.
Pechik I, Ji X, Fidelis K, Karavitis M, Moult J, Brinigar WS, Fronticelli C, Gilliland GL. Crystallographic, molecular modeling, and biophysical characterization of the valine beta 67 (E11)-->threonine variant of hemoglobin. Biochemistry. 1996 ;35(6):1935-45.
Zawadzke LE, Chen CC, Banerjee S, Li Z, Wäsch S, Kapadia G, Moult J, Herzberg O. Elimination of the hydrolytic water molecule in a class A beta-lactamase mutant: crystal structure and kinetics. Biochemistry. 1996 ;35(51):16475-82.
Fields BA, Goldbaum FA, Dall'Acqua W, Malchiodi EL, Cauerhff A, Schwarz FP, Ysern X, Poljak RJ, Mariuzza RA. Hydrogen bonding and solvent structure in an antigen-antibody interface. Crystal structures and thermodynamic characterization of three Fv mutants complexed with lysozyme. Biochemistry. 1996 ;35(48):15494-503.
Bucci E, Razynska A, Kwansa H, Gryczynski Z, Collins JH, Fronticelli C, Unger R, Braxenthaler M, Moult J, Ji X, et al. Positive and negative cooperativities at subsequent steps of oxygenation regulate the allosteric behavior of multistate sebacylhemoglobin. Biochemistry. 1996 ;35(11):3418-25.