Publications

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Structural Basis for Excision of 5-Formylcytosine by Thymine DNA Glycosylase.
Pidugu LS, Flowers JW, Coey CT, Pozharski E, Greenberg MM, Drohat AC. 2016. Structural Basis for Excision of 5-Formylcytosine by Thymine DNA Glycosylase. Biochemistry 55(45): 6205-6208.
Antibiofilm Activities of a Novel Chimeolysin against Streptococcus mutans under Physiological and Cariogenic Conditions.
Yang H, Bi Y, Shang X, Wang M, Linden SB, Li Y, Li Y, Nelson DC, Wei H. 2016. Antibiofilm Activities of a Novel Chimeolysin against Streptococcus mutans under Physiological and Cariogenic Conditions. Antimicrobial agents and chemotherapy 60(12): 7436-7443.
Modular construction of multi-subunit protein complexes using engineered tags and microbial transglutaminase.
Bhokisham N, Pakhchanian H, Quan D, Tschirhart T, Tsao CY, Payne GF, Bentley WE. 2016. Modular construction of multi-subunit protein complexes using engineered tags and microbial transglutaminase. Metabolic engineering 38: 1-9. DOI: 10.1016/j.ymben.2016.05.004
Global mapping of antibody recognition of the hepatitis C virus E2 glycoprotein: Implications for vaccine design.
Pierce BG, Keck ZY, Lau P, Fauvelle C, Gowthaman R, Baumert TF, Fuerst TR, Mariuzza RA, Foung SKH. 2016. Global mapping of antibody recognition of the hepatitis C virus E2 glycoprotein: Implications for vaccine design. Proceedings of the National Academy of Sciences of the United States of America 113(45): E6946-E6954. DOI: 10.1073/pnas.1614942113
Affinity maturation of a broadly neutralizing human monoclonal antibody that prevents acute hepatitis C virus infection in mice.
Keck ZY, Wang Y, Lau P, Lund G, Rangarajan S, Fauvelle C, Liao GC, Holtsberg FW, Warfield KL, Aman MJ, et al. 2016. Affinity maturation of a broadly neutralizing human monoclonal antibody that prevents acute hepatitis C virus infection in mice. Hepatology (Baltimore, Md.) 64(6): 1922-1933. DOI: 10.1002/hep.28850
Structural Insights into the Inhibitory Mechanism of an Antibody against B7-H6, a Stress-Induced Cellular Ligand for the Natural Killer Cell Receptor NKp30.
Xu X, Narni-Mancinelli E, Cantoni C, Li Y, Guia S, Gauthier L, Chen Q, Moretta A, Vély F, Eisenstein E, et al. 2016. Structural Insights into the Inhibitory Mechanism of an Antibody against B7-H6, a Stress-Induced Cellular Ligand for the Natural Killer Cell Receptor NKp30. Journal of molecular biology 428(22): 4457-4466. DOI: 10.1016/j.jmb.2016.09.011
Fusing Sensor Paradigms to Acquire Chemical Information: An Integrative Role for Smart Biopolymeric Hydrogels.
Kim E, Liu Y, Ben-Yoav H, Winkler TE, Yan K, Shi X, Shen J, Kelly DL, Ghodssi R, Bentley WE, et al. 2016. Fusing Sensor Paradigms to Acquire Chemical Information: An Integrative Role for Smart Biopolymeric Hydrogels. Advanced healthcare materials 5(20): 2595-2616. DOI: 10.1002/adhm.201600516
Inhibitor-Based Therapeutics for Treatment of Viral Hepatitis.
Dey D, Banerjee M. 2016. Inhibitor-Based Therapeutics for Treatment of Viral Hepatitis. Journal of clinical and translational hepatology 4(3): 248-257.
Performance of ZDOCK and IRAD in CAPRI rounds 28-34.
Vreven T, Pierce BG, Borrman TM, Weng Z. 2017. Performance of ZDOCK and IRAD in CAPRI rounds 28-34. Proteins 85(3): 408-416. DOI: 10.1002/prot.25186
Molecular-Level Interactions of Polyphosphazene Immunoadjuvants and Their Potential Role in Antigen Presentation and Cell Stimulation.
Andrianov AK, Marin A, Fuerst TR. 2016. Molecular-Level Interactions of Polyphosphazene Immunoadjuvants and Their Potential Role in Antigen Presentation and Cell Stimulation. Biomacromolecules 17(11): 3732-3742.
C-terminal region of Mad2 plays an important role during mitotic spindle checkpoint in fission yeast Schizosaccharomyces pombe.
Singh GK, Karade SS, Ranjan R, Ahamad N, Ahmed S. 2017. C-terminal region of Mad2 plays an important role during mitotic spindle checkpoint in fission yeast Schizosaccharomyces pombe. Molecular biology reports 44(1): 89-96. DOI: 10.1007/s11033-016-4083-y
Viral evasion and challenges of hepatitis C virus vaccine development.
Pierce BG, Keck ZY, Foung SK. 2016. Viral evasion and challenges of hepatitis C virus vaccine development. Current opinion in virology 20: 55-63. DOI: 10.1016/j.coviro.2016.09.004
Autoinducer-2 analogs and electric fields - an antibiotic-free bacterial biofilm combination treatment.
Subramanian S, Gerasopoulos K, Guo M, Sintim HO, Bentley WE, Ghodssi R. 2016. Autoinducer-2 analogs and electric fields - an antibiotic-free bacterial biofilm combination treatment. Biomedical microdevices 18(5): 95. DOI: 10.1007/s10544-016-0120-9
A small protein inhibits proliferating cell nuclear antigen by breaking the DNA clamp.
Altieri AS, Ladner JE, Li Z, Robinson H, Sallman ZF, Marino JP, Kelman Z. 2016. A small protein inhibits proliferating cell nuclear antigen by breaking the DNA clamp. Nucleic acids research 44(20): 10015.
A generalized framework for computational design and mutational scanning of T-cell receptor binding interfaces.
Riley TP, Ayres CM, Hellman LM, Singh NK, Cosiano M, Cimons JM, Anderson MJ, Piepenbrink KH, Pierce BG, Weng Z, et al. 2016. A generalized framework for computational design and mutational scanning of T-cell receptor binding interfaces. Protein engineering, design & selection : PEDS 29(12): 595-606.