IBBR Publications

Wang T, Nguyen A, Zhang L, Turko IV. Mass spectrometry enumeration of filamentous M13 bacteriophage. Anal Biochem. 2019 ;582:113354.

Pal LR, Kundu K, Yin Y, Moult J. Matching whole genomes to rare genetic disorders: Identification of potential causative variants using phenotype-weighted knowledge in the CAGI SickKids5 clinical genomes challenge. Hum Mutat. 2019 .

Bergonzo C, Grishaev A. Maximizing accuracy of RNA structure in refinement against residual dipolar couplings. J Biomol NMR. 2019 .

An J, Zeng T, Ji C, de Graaf S, Zheng Z, Xiao TTing, Deng X, Xiao S, Bisseling T, Limpens E, et al. A Medicago truncatula SWEET transporter implicated in arbuscule maintenance during arbuscular mycorrhizal symbiosis. New Phytol. 2019 .

Bedrov D, Piquemal J-P, Borodin O, Mackerell AD, Roux B, Schröder C. Molecular Dynamics Simulations of Ionic Liquids and Electrolytes Using Polarizable Force Fields. Chem Rev. 2019 .

Zheng X, Zhu K, Sun Q, Zhang W, Wang X, Cao H, Tan M, Xie Z, Zeng Y, Ye J, et al. Natural Variation in CCD4 Promoter Underpins Species-Specific Evolution of Red Coloration in Citrus Peel. Mol Plant. 2019 .

Chowdhury IRoy, Yeddula SGoutham Re, Pierce BG, Samal SK, Kim S-H. Newcastle disease virus vectors expressing consensus sequence of the H7 HA protein protect broiler chickens and turkeys against highly pathogenic H7N8 virus. Vaccine. 2019 ;37(35):4956-4962.

Briggs KT, Taraban MB, Wang W, Y Yu B. Nondestructive Quantitative Inspection of Drug Products Using Benchtop NMR Relaxometry-the Case of NovoMix® 30. AAPS PharmSciTech. 2019 ;20(5):189.

Ramalingam S, Ramamurthy VP, Gediya LK, Murigi FN, Purushottamachar P, Huang W, Choi EYong, Zhang Y, Vasaitis TS, Kane MA, et al. The Novel Mnk1/2 Degrader and Apoptosis Inducer VNLG-152 Potently Inhibits TNBC Tumor Growth and Metastasis. Cancers (Basel). 2019 ;11(3).

Ustach VD, Lakkaraju SKaushik, Jo S, Yu W, Jiang W, Mackerell AD. Optimization and Evaluation of Site-Identification by Ligand Competitive Saturation (SILCS) as a Tool for Target-Based Ligand Optimization. J Chem Inf Model. 2019 .

Austin JW, Buckner CM, Kardava L, Wang W, Zhang X, Melson VA, Swanson RG, Martins AJ, Zhou JQ, Hoehn KB, et al. Overexpression of T-bet in HIV infection is associated with accumulation of B cells outside germinal centers and poor affinity maturation. Sci Transl Med. 2019 ;11(520).

Monzon AMiguel, Carraro M, Chiricosta L, Reggiani F, Han J, Ozturk K, Wang Y, Miller M, Bromberg Y, Capriotti E, et al. Performance of computational methods for the evaluation of Pericentriolar Material 1 missense variants in CAGI-5. Hum Mutat. 2019 .

Virgile C, Hauk P, Wu H-C, Bentley WE. Plasmid-encoded protein attenuates E. coli swimming velocity and cell growth, not reprogrammed regulatory functions. Biotechnol Prog. 2019 :e2778.

Brannan JM, He S, Howell KA, Prugar LI, Zhu W, Vu H, Shulenin S, Kailasan S, Raina H, Wong G, et al. Post-exposure immunotherapy for two ebolaviruses and Marburg virus in nonhuman primates. Nat Commun. 2019 ;10(1):105.

Edison AS, Le Guennec A, Delaglio F, Kupče Ē. Practical Guidelines for C-Based NMR Metabolomics. Methods Mol Biol. 2019 ;2037:69-95.

McInnes G, Daneshjou R, Katsonis P, Lichtarge O, Srinivasan RG, Rana S, Radivojac P, Mooney SD, Pagel KA, Stamboulian M, et al. Predicting venous thromboembolism risk from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges. Hum Mutat. 2019 .

Kim E, Kang M, Liu H, Cao C, Liu C, Bentley WE, Qu X, Payne GF. Pro- and Anti-oxidant Properties of Redox-Active Catechol-Chitosan Films. Front Chem. 2019 ;7:541.

Coven SL, Bibart M, Frost R, D Gallagher T, Guinipero T, Valasek AE, Olshefski R. A Quality Improvement Approach to Increase Exercise Assessment in Survivors of Childhood Leukemia. Pediatr Qual Saf. 2019 ;4(4):e198.

Gargava A, Ahn S, Bentley WE, Raghavan SR. Rapid Electroformation of Biopolymer Gels in Prescribed Shapes and Patterns: A Simpler Alternative to 3-D Printing. ACS Appl Mater Interfaces. 2019 ;11(40):37103-37111.

Kim E, Panzella L, Napolitano A, Payne GF. Redox Activities of Melanins Investigated by Electrochemical Reverse Engineering: Implications for their Roles in Oxidative Stress. J Invest Dermatol. 2019 .

Kim E, Li J, Kang M, Kelly DL, Chen S, Napolitano A, Panzella L, Shi X, Yan K, Wu S, et al. Redox Is a Global Biodevice Information Processing Modality. Proc IEEE Inst Electr Electron Eng. 2019 ;107(7):1402-1424.

VanArsdale E, Tsao C-Y, Liu Y, Chen C-Y, Payne GF, Bentley WE. Redox-based synthetic biology enables electrochemical detection of the herbicides dicamba and RoundupTM via rewired Escherichia coli. ACS Sens. 2019 .

Andreoletti G, Pal LR, Moult J, Brenner SE. Reports from the fifth edition of CAGI: The Critical Assessment of Genome Interpretation. Hum Mutat. 2019 .

Storz JF, Natarajan C, Signore AV, Witt CC, McCandlish DM, Stoltzfus A. The role of mutation bias in adaptive molecular evolution: insights from convergent changes in protein function. Philos Trans R Soc Lond B Biol Sci. 2019 ;374(1777):20180238.

Liu H, Qu X, Tan H, Song J, Lei M, Kim E, Payne GF, Liu C. Role of polydopamine's redox-activity on its pro-oxidant, radical-scavenging, and antimicrobial activities. Acta Biomater. 2019 .