IBBR Publications

Found 2832 results
Anderson KW, Gallagher ES, Hudgens JW. Automated removal of phospholipids from membrane proteins for H/D exchange mass spectrometry workflows. Anal Chem. 2018 .
Selin V, Albright V, Ankner JF, Marin A, Andrianov AK, Sukhishvili SA. Biocompatible Nanocoatings of Fluorinated Polyphosphazenes through Aqueous Assembly. ACS Appl Mater Interfaces. 2018 .
Liu Y, Wu H-C, Bhokisham N, Li J, Hong K-L, Quan DN, Tsao C-Y, Bentley WE, Payne GF. Biofabricating Functional Soft Matter Using Protein Engineering to Enable Enzymatic Assembly. Bioconjug Chem. 2018 .
Liu H, Qu X, Kim E, Lei M, Dai K, Tan X, Xu M, Li J, Liu Y, Shi X, et al. Bio-inspired redox-cycling antimicrobial film for sustained generation of reactive oxygen species. Biomaterials. 2018 ;162:109-122.
Bentley WE, Martin DK, Gotoh T. Biomimetic and Bioinspired Biotechnology. Biotechnol J. 2018 ;13(12):e1800670.
Zhuang X, Yang X, Altieri AS, Nelson DC, Pal U. Borrelia burgdorferi surface-located Lmp1 protein processed into region-specific polypeptides that are critical for microbial persistence. Cell Microbiol. 2018 :e12855.
Yan K, Liu Y, Guan Y, Bhokisham N, Tsao C-Y, Kim E, Shi X-W, Wang Q, Bentley WE, Payne GF. Catechol-chitosan redox capacitor for added amplification in electrochemical immunoanalysis. Colloids Surf B Biointerfaces. 2018 ;169:470-477.
Khan HMuhammad, Mackerell AD, Reuter N. Cation-π interactions between methylated ammonium groups and tryptophan in the CHARMM36 additive force field. J Chem Theory Comput. 2018 .
Castellanos MMonica, Howell SC, D Gallagher T, Curtis JE. Characterization of the NISTmAb Reference Material using small-angle scattering and molecular simulation : Part I: Dilute protein solutions. Anal Bioanal Chem. 2018 ;410(8):2141-2159.
Aytenfisu AH, Yang M, Mackerell AD. CHARMM Drude Polarizable Force Field for Glycosidic Linkages Involving Pyranoses and Furanoses. J Chem Theory Comput. 2018 .
Villa F, Mackerell AD, Roux B, Simonson T. Classical Drude Polarizable Force Field Model for Methyl Phosphate and Its Interactions with Mg. J Phys Chem A. 2018 ;122(29):6147-6155.
Aleksandrov A, Lin F-Y, Roux B, Mackerell AD. Combining the polarizable Drude force field with a continuum electrostatic Poisson-Boltzmann implicit solvation model. J Comput Chem. 2018 .
Wu Y, Ma X, Pan Z, Kale SD, Song Y, King H, Zhang Q, Presley C, Deng X, Wei C-I, et al. Comparative genome analyses reveal sequence features reflecting distinct modes of host-adaptation between dicot and monocot powdery mildew. BMC Genomics. 2018 ;19(1):705.
An J, Sun M, van Velzen R, Ji C, Zheng Z, Limpens E, Bisseling T, Deng X, Xiao S, Pan Z. Comparative transcriptome analysis of Poncirus trifoliata identifies a core set of genes involved in arbuscular mycorrhizal symbiosis. J Exp Bot. 2018 ;69(21):5255-5264.
König G, Pickard FC, Huang J, Thiel W, Mackerell AD, Brooks BR, York DM. A Comparison of QM/MM Simulations with and without the Drude Oscillator Model Based on Hydration Free Energies of Simple Solutes. Molecules. 2018 ;23(10).
Guest JD, Pierce BG. Computational Modeling of Hepatitis C Virus Envelope Glycoprotein Structure and Recognition. Front Immunol. 2018 ;9:1117.
S Hasan S, Sun C, Kim AS, Watanabe Y, Chen C-L, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, et al. Cryo-EM Structures of Eastern Equine Encephalitis Virus Reveal Mechanisms of Virus Disassembly and Antibody Neutralization. Cell Rep. 2018 ;25(11):3136-3147.e5.
D Gallagher T, Karageorgos I, Hudgens JW, Galvin CV. Data on crystal organization in the structure of the Fab fragment from the NIST reference antibody, RM 8671. Data Brief. 2018 ;16:29-36.
Sun D, Lakkaraju SKaushik, Jo S, Mackerell AD. Determination of Ionic Hydration Free Energies with Grand Canonical Monte Carlo/Molecular Dynamics Simulations in Explicit Water. J Chem Theory Comput. 2018 .
Mouchahoir T, Schiel JE. Development of an LC-MS/MS peptide mapping protocol for the NISTmAb. Anal Bioanal Chem. 2018 ;410(8):2111-2126.
Mckay R, Hauk P, Quan D, Bentley WE. Development of Cell-Based Sentinels for Nitric Oxide: Ensuring Marker Expression and Unimodality. ACS Synth Biol. 2018 ;7(7):1694-1701.
Turner A, Yandrofski K, Telikepalli S, King J, Heckert A, Filliben J, Ripple D, Schiel JE. Development of orthogonal NISTmAb size heterogeneity control methods. Anal Bioanal Chem. 2018 ;410(8):2095-2110.
Etobayeva I, Linden SB, Alem F, Harb L, Rizkalla L, Mosier PD, Johnson AA, Temple L, Hakami RM, Nelson DC. Discovery and Biochemical Characterization of PlyP56, PlyN74, and PlyTB40- Specific Endolysins. Viruses. 2018 ;10(5).
Altieri AS, Kelman Z. DNA Sliding Clamps as Therapeutic Targets. Front Mol Biosci. 2018 ;5:87.
Hu Y, Li Y, Hou F, Wan D, Cheng Y, Han Y, Gao Y, Liu J, Guo Y, Xiao S, et al. Ectopic expression of Arabidopsis broad-spectrum resistance gene RPW8.2 improves the resistance to powdery mildew in grapevine (Vitis vinifera). Plant Sci. 2018 ;267:20-31.