IBBR Publications

Stoltzfus A, McCandlish DM. Mutational biases influence parallel adaptation. Mol Biol Evol. 2017 .

Cheung CSF, Anderson KW, Patel PM, Cade KL, Phinney KW, Turko IV. A new approach to quantification of mAb aggregates using peptide affinity probes. Sci Rep. 2017 ;7:42497.

Lu AXi, Oh H, Terrell JL, Bentley WE, Raghavan SR. A new design for an artificial cell: polymer microcapsules with addressable inner compartments that can harbor biomolecules, colloids or microbial species. Chem Sci. 2017 ;8(10):6893-6903.

Maciejewski MW, Schuyler AD, Gryk MR, Moraru II, Romero PR, Ulrich EL, Eghbalnia HR, Livny M, Delaglio F, Hoch JC. NMRbox: A Resource for Biomolecular NMR Computation. Biophys J. 2017 ;112(8):1529-1534.

Delaglio F, Walker GS, Farley KA, Sharma R, Hoch JC, Arbogast LW, Brinson RG, Marino JP. Non-Uniform Sampling for All: More NMR Spectral Quality, Less Measurement Time. Am Pharm Rev. 2017 ;20(4).

McCarty DJ, Huang W, Kane MA, Purushottamachar P, Gediya LK, Njar VCO. Novel galeterone analogs act independently of AR and AR-V7 for the activation of the unfolded protein response and induction of apoptosis in the CWR22Rv1 prostate cancer cell model. Oncotarget. 2017 ;8(51):88501-88516.

Shah NG, Tulapurkar ME, Ramarathnam A, Brophy A, Martinez R, Hom K, Hodges T, Samadani R, Singh IS, Mackerell AD, et al. Novel Noncatalytic Substrate-Selective p38α-Specific MAPK Inhibitors with Endothelial-Stabilizing and Anti-Inflammatory Activity. J Immunol. 2017 ;198(8):3296-3306.

Cayatte C, Marin A, Rajani GManohar, Schneider-Ohrum K, Bennett ASnell, Marshall JD, Andrianov AK. PCPP-Adjuvanted Respiratory Syncytial Virus (RSV) sF Subunit Vaccine: Self-Assembled Supramolecular Complexes Enable Enhanced Immunogenicity and Protection. Mol Pharm. 2017 .

Carraro M, Minervini G, Giollo M, Bromberg Y, Capriotti E, Casadio R, Dunbrack R, Elefanti L, Fariselli P, Ferrari C, et al. Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI. Hum Mutat. 2017 .

Kulkarni P, Jolly MKumar, Jia D, Mooney SM, Bhargava A, Kagohara LT, Chen Y, Hao P, He Y, Veltri RW, et al. Phosphorylation-induced conformational dynamics in an intrinsically disordered protein and potential role in phenotypic heterogeneity. Proc Natl Acad Sci U S A. 2017 .

Lemkul JA, Mackerell AD. Polarizable Force Field for DNA Based on the Classical Drude Oscillator: II. Microsecond Molecular Dynamics Simulations of Duplex DNA. J Chem Theory Comput. 2017 ;13(5):2072-2085.

Lemkul JA, Mackerell AD. Polarizable Force Field for DNA Based on the Classical Drude Oscillator: I. Refinement Using Quantum Mechanical Base Stacking and Conformational Energetics. J Chem Theory Comput. 2017 ;13(5):2053-2071.

Williams LTD, Ofek GA, Schätzle S, McDaniel JR, Lu X, Nicely NI, Wu L, Lougheed CS, Bradley T, Louder MK, et al. Potent and broad HIV-neutralizing antibodies in memory B cells and plasma. Sci Immunol. 2017 ;2(7).

Shen Y, Roche J, Grishaev A, Bax A. Prediction of nearest neighbor effects on backbone torsion angles and NMR scalar coupling constants in disordered proteins. Protein Sci. 2017 .

Thakur M, Sharma K, Chao K, Smith AA, Herzberg O, Pal U. A protein-protein interaction dictates Borrelial infectivity. Sci Rep. 2017 ;7(1):2932.

Spigolon D, D Gallagher T, Velazquez-Campoy A, Bulone D, Narang J, San Biagio PLuigi, Cappello F, Macario AJL, de Macario EConway, Robb FT. Quantitative analysis of the impact of a human pathogenic mutation on the CCT5 chaperonin subunit using a proxy archaeal ortholog. Biochem Biophys Rep. 2017 ;12:66-71.

Kang M, Kim E, Winkler TE, Banis G, Liu Y, Kitchen CA, Kelly DL, Ghodssi R, Payne GF. Reliable clinical serum analysis with reusable electrochemical sensor: Toward point-of-care measurement of the antipsychotic medication clozapine. Biosens Bioelectron. 2017 ;95:55-59.

Pal LR, Chao KL, Moult J, Herzberg O. Reply to HU et al.: On the interpretation of gasdermin-B expression quantitative trait loci data. Proc Natl Acad Sci U S A. 2017 ;114(38):E7863-E7864.

Hoskins RA, Repo S, Barsky D, Andreoletti G, Moult J, Brenner SE. Reports from CAGI: The Critical Assessment of Genome Interpretation. Hum Mutat. 2017 ;38(9):1039-1041.

Li Y, Zhang Y, Wang Q-X, Wang T-T, Cao X-L, Zhao Z-X, Zhao S-L, Xu Y-J, Xiao Z-Y, Li J-L, et al. RESISTANCE TO POWDERY MILDEW8.1 boosts pattern-triggered immunity against multiple pathogens in Arabidopsis and rice. Plant Biotechnol J. 2017 .

Karageorgos I, Silin VI, Zvonok N, Marino JP, Janero DR, Makriyannis A. The role of human monoacylglycerol lipase (hMAGL) binding pocket in breakup of unsaturated phospholipid membranes. Anal Biochem. 2017 .

Chen G, Yang X, Ko A, Sun X, Gao M, Zhang Y, Shi A, Mariuzza RA, Weng N-P. Sequence and Structural Analyses Reveal Distinct and Highly Diverse Human CD8(+) TCR Repertoires to Immunodominant Viral Antigens. Cell Rep. 2017 ;19(3):569-583.

Riley KR, Sims CM, Wood IT, Vanderah DJ, Walker ML. Short-chained oligo(ethylene oxide)-functionalized gold nanoparticles: realization of significant protein resistance. Anal Bioanal Chem. 2017 .

Yang S, Höti N, Yang W, Liu Y, Chen L, Li S, Zhang H. Simultaneous analyses of N-linked and O-linked glycans of ovarian cancer cells using solid-phase chemoenzymatic method. Clin Proteomics. 2017 ;14:3.

Kim E, Kang M, Tschirhart T, Malo M, Dadachova E, Cao G, Yin J-J, Bentley WE, Wang Z, Payne GF. Spectroelectrochemical Reverse Engineering DemonstratesThat Melanin's Redox and Radical Scavenging Activities Are Linked. Biomacromolecules. 2017 .