IBBR Publications

Found 2548 results
2016
Cavalier MC, Melville Z, Aligholizadeh E, E Raman P, Yu W, Fang L, Alasady M, Pierce AD, Wilder PT, Mackerell AD, et al. Novel protein-inhibitor interactions in site 3 of Ca(2+)-bound S100B as discovered by X-ray crystallography. Acta Crystallogr D Struct Biol. 2016 ;72(Pt 6):753-60.
Kwon YD, Georgiev IS, Ofek GA, Zhang B, Asokan M, Bailer RT, Bao A, Caruso W, Chen X, Choe M, et al. Optimization of the Solubility of HIV-1-Neutralizing Antibody 10E8 through Somatic Variation and Structure-Based Design. J Virol. 2016 .
Riabinina O, Task D, Marr E, Lin C-C, Alford R, O'Brochta DA, Potter CJ. Organization of olfactory centres in the malaria mosquito Anopheles gambiae. Nat Commun. 2016 ;7:13010.
Gutiérrez ISoteras, Lin F-Y, Vanommeslaeghe K, Lemkul JA, Armacost KA, Brooks CL, Mackerell AD. Parametrization of halogen bonds in the CHARMM general force field: Improved treatment of ligand-protein interactions. Bioorg Med Chem. 2016 ;24(20):4812-4825.
Kim E, W Leverage T, Liu Y, Panzella L, Alfieri MLaura, Napolitano A, Bentley WE, Payne GF. Paraquat-Melanin Redox-Cycling: Evidence from Electrochemical Reverse Engineering. ACS Chem Neurosci. 2016 .
Xian F, Zi J, Wang Q, Lou X, Sun H, Lin L, Hou G, Rao W, Yin C, Wu L, et al. Peptide Biosynthesis with Stable Isotope Labeling from a Cell-free Expression System for Targeted Proteomics with Absolute Quantification. Mol Cell Proteomics. 2016 .
Vreven T, Pierce BG, Borrman TM, Weng Z. Performance of ZDOCK and IRAD in CAPRI rounds 28-34. Proteins. 2016 .
Ghasriani H, Hodgson DJ, Brinson RG, McEwen I, Buhse LF, Kozlowski S, Aubin Y, Marino JP, Keire DA. Precision and robustness of 2D-NMR for structure assessment of filgrastim biosimilars. Nat Biotechnol. 2016 ;34(2):139-41.
Lensink MF, Velankar S, Kryshtafovych A, Huang S-Y, Schneidman-Duhovny D, Sali A, Segura J, Fernandez-Fuentes N, Viswanath S, Elber R, et al. Prediction of homo- and hetero-protein complexes by protein docking and template-based modeling: a CASP-CAPRI experiment. Proteins. 2016 .
Liang Z, Kang M, Payne GF, Wang X, Sun R-C. Probing Energy and Electron Transfer Mechanisms in Fluorescence Quenching of Biomass Carbon Quantum Dots. ACS Appl Mater Interfaces. 2016 .
Zheng W, Borgia A, Buholzer K, Grishaev A, Schuler B, Best RB. Probing the Action of Chemical Denaturant on an Intrinsically Disordered Protein by Simulation and Experiment. J Am Chem Soc. 2016 ;138(36):11702-13.
de Macario EConway, Robb FT, Macario AJL. Prokaryotic Chaperonins as Experimental Models for Elucidating Structure-Function Abnormalities of Human Pathogenic Mutant Counterparts. Front Mol Biosci. 2016 ;3:84.
Kulkarni P, A Dunker K, Weninger K, Orban J. Prostate-associated gene 4 (PAGE4), an intrinsically disordered cancer/testis antigen, is a novel therapeutic target for prostate cancer. Asian J Androl. 2016 .
An YJun, Rowland SE, Robb FT, Cha S-S. Purification, crystallization, and preliminary X-ray crystallographic analysis of the Group III chaperonin from Carboxydothermus hydrogenoformans. J Microbiol. 2016 ;54(6):440-4.
Scott KBauer, Turko IV, Phinney KW. QconCAT: Internal Standard for Protein Quantification. Methods Enzymol. 2016 ;566:289-303.
Deshmukh L, Schwieters CD, Grishaev A, G Clore M. Quantitative Characterization of Configurational Space Sampled by HIV-1 Nucleocapsid Using Solution NMR, X-ray Scattering and Protein Engineering. Chemphyschem. 2016 ;17(11):1548-52.
Quan DN, Tsao C-Y, Wu H-C, Bentley WE. Quorum Sensing Desynchronization Leads to Bimodality and Patterned Behaviors. PLoS Comput Biol. 2016 ;12(4):e1004781.
Cardenas MG, Yu W, Beguelin W, Teater MR, Geng H, Goldstein RL, Oswald E, Hatzi K, Yang S-N, Cohen J, et al. Rationally designed BCL6 inhibitors target activated B cell diffuse large B cell lymphoma. J Clin Invest. 2016 ;126(9):3351-62.
Zang F, Gerasopoulos K, Fan XZhu, Brown AD, Culver JN, Ghodssi R. Real-time monitoring of macromolecular biosensing probe self-assembly and on-chip ELISA using impedimetric microsensors. Biosens Bioelectron. 2016 ;81:401-407.
Kim E, Winkler TE, Kitchen C, Kang M, Banis G, Bentley WE, Kelly DL, Ghodssi R, Payne GF. Redox Probing for Chemical Information of Oxidative Stress. Anal Chem. 2016 .
Glassford I, Teijaro CN, Daher SS, Weil A, Small MC, Redhu SK, Colussi DJ, Jacobson MA, Childers WE, Buttaro B, et al. Ribosome-Templated Azide-Alkyne Cycloadditions: Synthesis of Potent Macrolide Antibiotics by In Situ Click Chemistry. J Am Chem Soc. 2016 ;138(9):3136-44.
Andrianov AK, Marin A, Fuerst TR. Self-assembly of polyphosphazene immunoadjuvant with poly(ethylene oxide) enables advanced nanoscale delivery modalities and regulated pH-dependent cellular membrane activity. Heliyon [Internet]. 2016 ;2:Article e00102. Available from: http://www.sciencedirect.com/science/article/pii/S2405844016300664
Andrianov AK, Marin A, Fuerst TR. Self-assembly of polyphosphazene immunoadjuvant with poly(ethylene oxide) enables advanced nanoscale delivery modalities and regulated pH-dependent cellular membrane activity. Heliyon. 2016 ;2(4):e00102.
Shuvaev VV, Muro S, Arguiri E, Khoshnejad M, Tliba S, Christofidou-Solomidou M, Muzykantov VR. Size and targeting to PECAM vs ICAM control endothelial delivery, internalization and protective effect of multimolecular SOD conjugates. J Control Release. 2016 .
Astudillo L, Da Silva TG, Wang Z, Han X, Jin K, VanWye J, Zhu X, Weaver K, Oashi T, Lopes PEM, et al. The Small Molecule IMR-1 Inhibits the Notch Transcriptional Activation Complex to Suppress Tumorigenesis. Cancer Res. 2016 ;76(12):3593-603.