Publications

High performance anion exchange chromatography purification of probiotic bacterial extracellular vesicles enhances purity and anti-inflammatory efficacy.
Pirolli NH, Reus LSC, Mamczarz Z, Khan S, Bentley WE, Jay SM. 2023. High performance anion exchange chromatography purification of probiotic bacterial extracellular vesicles enhances purity and anti-inflammatory efficacy. Biotechnology and bioengineering : . DOI: 10.1002/bit.28522
Divalent ions as mediators of carbonylation in cardiac myosin binding protein C.
Bergonzo C, Aryal B, Rao VA. 2023. Divalent ions as mediators of carbonylation in cardiac myosin binding protein C. Journal of molecular graphics & modelling 124: 108576. DOI: 10.1016/j.jmgm.2023.108576
Contributions from ClpS surface residues in modulating N-terminal peptide binding and their implications for NAAB development.
Callahan NW, Siegall WB, Bergonzo C, Marino JP, Kelman Z. 2023. Contributions from ClpS surface residues in modulating N-terminal peptide binding and their implications for NAAB development. Protein engineering, design & selection : PEDS : . DOI: 10.1093/protein/gzad007
Protein target highlights in CASP15: Analysis of models by structure providers.
Alexander LT, Durairaj J, Kryshtafovych A, Abriata LA, Bayo Y, Bhabha G, Breyton C, Caulton SG, Chen J, Degroux S, et al. 2023. Protein target highlights in CASP15: Analysis of models by structure providers. Proteins : . DOI: 10.1002/prot.26545
Associations between sleep health and grey matter volume in the UK Biobank cohort (n = 33 356).
Schiel JE, Tamm S, Holub F, Petri R, Dashti HS, Domschke K, Feige B, Goodman MO, Jones SE, Lane JM, et al. 2023. Associations between sleep health and grey matter volume in the UK Biobank cohort (<i>n</i> = 33 356). Brain communications 5(4): fcad200. DOI: 10.1093/braincomms/fcad200
A quasi-experimental study examining the efficacy of multimodal bot screening tools and recommendations to preserve data integrity in online psychological research.
Simone M, Cascalheira CJ, Pierce BG. 2023. A quasi-experimental study examining the efficacy of multimodal bot screening tools and recommendations to preserve data integrity in online psychological research. The American psychologist : . DOI: 10.1037/amp0001183
Nitro-benzylideneoxymorphone, a bifunctional mu and delta opioid receptor ligand with high mu opioid receptor efficacy.
Olson KM, Devereaux AL, Chatterjee P, SaldaƱa-Shumaker SL, Shafer A, Plotkin A, Kandasamy R, MacKerell AD, Traynor JR, Cunningham CW. 2023. Nitro-benzylideneoxymorphone, a bifunctional mu and delta opioid receptor ligand with high mu opioid receptor efficacy. Frontiers in pharmacology 14: 1230053. DOI: 10.3389/fphar.2023.1230053
RNA target highlights in CASP15: Evaluation of predicted models by structure providers.
Kretsch RC, Andersen ES, Bujnicki JM, Chiu W, Das R, Luo B, Masquida B, McRae EKS, Schroeder GM, Su Z, et al. 2023. RNA target highlights in CASP15: Evaluation of predicted models by structure providers. Proteins : . DOI: 10.1002/prot.26550
Evaluation of AlphaFold Antibody-Antigen Modeling with Implications for Improving Predictive Accuracy.
Yin R, Pierce BG. 2023. Evaluation of AlphaFold Antibody-Antigen Modeling with Implications for Improving Predictive Accuracy. bioRxiv : the preprint server for biology : . DOI: 10.1101/2023.07.05.547832
Tracking B cell responses to the SARS-CoV-2 mRNA-1273 vaccine.
Lopes de Assis F, Hoehn KB, Zhang X, Kardava L, Smith CD, El Merhebi O, Buckner CM, Trihemasava K, Wang W, Seamon CA, et al. 2023. Tracking B cell responses to the SARS-CoV-2 mRNA-1273 vaccine. Cell reports 42(7): 112780. DOI: 10.1016/j.celrep.2023.112780
Targeted Nanocarriers Co-Opting Pulmonary Intravascular Leukocytes for Drug Delivery to the Injured Brain.
Nong J, Glassman PM, Myerson JW, Zuluaga-Ramirez V, Rodriguez-Garcia A, Mukalel A, Omo-Lamai S, Walsh LR, Zamora ME, Gong X, et al. 2023. Targeted Nanocarriers Co-Opting Pulmonary Intravascular Leukocytes for Drug Delivery to the Injured Brain. ACS nano : . DOI: 10.1021/acsnano.2c08275
Structure of engineered hepatitis C virus E1E2 ectodomain in complex with neutralizing antibodies.
Metcalf MC, Janus BM, Yin R, Wang R, Guest JD, Pozharski E, Law M, Mariuzza RA, Toth EA, Pierce BG, et al. 2023. Structure of engineered hepatitis C virus E1E2 ectodomain in complex with neutralizing antibodies. Nature communications 14(1): 3980. DOI: 10.1038/s41467-023-39659-z
More than just pattern recognition: Prediction of uncommon protein structure features by AI methods.
Herzberg O, Moult J. 2023. More than just pattern recognition: Prediction of uncommon protein structure features by AI methods. Proceedings of the National Academy of Sciences of the United States of America 120(28): e2221745120. DOI: 10.1073/pnas.2221745120
Salinization Dramatically Enhance the Anti-Prostate Cancer Efficacies of AR/AR-V7 and Mnk1/2 Molecular Glue Degraders, Galeterone and VNPP433-3Ī² Which Outperform Docetaxel and Enzalutamide in CRPC CWR22Rv1 Xenograft Mouse Model.
Thankan RS, Thomas E, Purushottamachar P, Weber DJ, Njar VCO. 2023. Salinization Dramatically Enhance the Anti-Prostate Cancer Efficacies of AR/AR-V7 and Mnk1/2 Molecular Glue Degraders, Galeterone and VNPP433-3Ī² Which Outperform Docetaxel and Enzalutamide in CRPC CWR22Rv1 Xenograft Mouse Model. Bioorganic chemistry 139: 106700. DOI: 10.1016/j.bioorg.2023.106700
Identification of a novel transport system in Borrelia burgdorferi that links the inner and outer membranes.
Bowen HG, Kenedy MR, Johnson DK, MacKerell AD, Akins DR. 2023. Identification of a novel transport system in Borrelia burgdorferi that links the inner and outer membranes. Pathogens and disease : . DOI: 10.1093/femspd/ftad014